Structure of PDB 1u3h Chain C Binding Site BS01

Receptor Information

>1u3h Chain C (length=182) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

IEADHVGSYGIVVYQSPGDIGQYTFEFDGDELFYVDLDKKETIWMLPEFA
QLRSFDPQGGLQNIATGKHNLGVLTKRSNSTPATNEAPQATVFPKSPVLL
GQPNTLICFVDNIFPPVINITWLRNSKSVADGVYETSFFVNRDYSFHKLS
YLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPE

Ligand information

>1u3h Chain P (length=12) Species: 32630 (synthetic construct) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

SRGGASQYRPSQ

Receptor-Ligand Complex Structure

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Structure summary

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PDB	1u3h Structure of an autoimmune T cell receptor complexed with class II peptide-MHC: insights into MHC bias and antigen specificity
Resolution	2.42 Å
Binding residue (original residue number in PDB)	Y9 F24 R52 S53 F54 N62 T65 N69
Binding residue (residue number reindexed from 1)	Y9 F25 R53 S54 F55 N63 T66 N70

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Biological Process
GO:0006955	immune response
GO:0019882	antigen processing and presentation

	Cellular Component
GO:0016020	membrane
GO:0042613	MHC class II protein complex

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Biological Process

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Cellular Component

External links

PDB	RCSB:1u3h, PDBe:1u3h, PDBj:1u3h
PDBsum	1u3h
PubMed	15664161
UniProt	P14438\|HA2U_MOUSE H-2 class II histocompatibility antigen, A-U alpha chain (Fragment) (Gene Name=H2-Aa)

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