Structure of PDB 1men Chain C Binding Site BS01

Receptor Information
>1men Chain C (length=201) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RILVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERA
GIPTRVINHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQK
WNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQII
LQEAVPVKRGDTVATLSERVKLAEHKIFPAALQLVASGTVQLGENGKICW
V
Ligand information
Ligand IDGAR
InChIInChI=1S/C7H15N2O8P/c8-1-4(10)9-7-6(12)5(11)3(17-7)2-16-18(13,14)15/h3,5-7,11-12H,1-2,8H2,(H,9,10)(H2,13,14,15)/p-2/t3-,5-,6-,7-/m1/s1
InChIKeyOBQMLSFOUZUIOB-SHUUEZRQSA-L
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C([C@@H]1[C@H]([C@H]([C@@H](O1)NC(=O)CN)O)O)OP(=O)([O-])[O-]
ACDLabs 10.04O=C(NC1OC(C(O)C1O)COP([O-])([O-])=O)CN
CACTVS 3.341NCC(=O)N[CH]1O[CH](CO[P]([O-])([O-])=O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C(C1C(C(C(O1)NC(=O)CN)O)O)OP(=O)([O-])[O-]
CACTVS 3.341NCC(=O)N[C@@H]1O[C@H](CO[P]([O-])([O-])=O)[C@@H](O)[C@H]1O
FormulaC7 H13 N2 O8 P
NameGLYCINAMIDE RIBONUCLEOTIDE
ChEMBL
DrugBank
ZINC
PDB chain1men Chain C Residue 225 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1men Crystal structures of human GAR Tfase of low and high pH and with substrate beta-GAR
Resolution2.23 Å
Binding residue
(original residue number in PDB)
G11 S12 N13 M89 I107 P109 K170 E173
Binding residue
(residue number reindexed from 1)
G12 S13 N14 M90 I108 P110 K171 E174
Annotation score5
Enzymatic activity
Catalytic site (original residue number in PDB) N106 H108 T135 D144
Catalytic site (residue number reindexed from 1) N107 H109 T136 D145
Enzyme Commision number 2.1.2.2: phosphoribosylglycinamide formyltransferase 1.
6.3.3.1: phosphoribosylformylglycinamidine cyclo-ligase.
6.3.4.13: phosphoribosylamine--glycine ligase.
Gene Ontology
Molecular Function
GO:0004644 phosphoribosylglycinamide formyltransferase activity
Biological Process
GO:0006189 'de novo' IMP biosynthetic process
GO:0009058 biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:1men, PDBe:1men, PDBj:1men
PDBsum1men
PubMed12450384
UniProtP22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 (Gene Name=GART)

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