Structure of PDB 1hzz Chain C Binding Site BS01
Receptor Information
>1hzz Chain C (length=174) Species:
1085
(Rhodospirillum rubrum) [
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SVKAGSAEDAAFIMKNASKVIIVPGYGMAVAQAQHALREMADVLKKEGVE
VSYAIHPVAGRMPGHMNVLLAEANVPYDEVFELEEINSSFQTADVAFVIG
ANDVTNPAAKTDPSSPIYGMPILDVEKAGTVLFIKRSMASGYAGVENELF
FRNNTMMLFGDAKKMTEQIVQAMN
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
1hzz Chain C Residue 300 [
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Receptor-Ligand Complex Structure
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PDB
1hzz
The crystal structure of an asymmetric complex of the two nucleotide binding components of proton-translocating transhydrogenase.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
G54 Y55 G56 V87 G89 R90 M91 G129 A130 N131 D132 V133 K164 R165 S166 G170 Y171 A191
Binding residue
(residue number reindexed from 1)
G25 Y26 G27 V58 G60 R61 M62 G100 A101 N102 D103 V104 K135 R136 S137 G141 Y142 A162
Annotation score
4
Enzymatic activity
Catalytic site (original residue number in PDB)
Y55 R90 D132 Y171
Catalytic site (residue number reindexed from 1)
Y26 R61 D103 Y142
Enzyme Commision number
7.1.1.1
: proton-translocating NAD(P)(+) transhydrogenase.
External links
PDB
RCSB:1hzz
,
PDBe:1hzz
,
PDBj:1hzz
PDBsum
1hzz
PubMed
11250201
UniProt
Q2RSB4
|PNTB_RHORT NAD(P) transhydrogenase subunit beta (Gene Name=pntB)
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