Structure of PDB 1fwi Chain C Binding Site BS01

Receptor Information
>1fwi Chain C (length=551) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNISRQAYADMFGPTVGDKVRLADTELWIEVEDDLTTYGEEVKFGGGKVI
RDGMGQGQMLAADCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGN
PDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTAIHWICPQQAEEALVSGV
TTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNVSQ
PDALREQVAAGVIGLKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLN
ESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPT
LPYTLNTIDEHLDMLFAESRIRRETIAAEDVLHDLGAFSLTSSDSQAMGR
VGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHG
IAHEVGSIEVGKLADLVVWSPAFFGVKPATVIKGGMIAIAPMGDINASIP
TPQPVHYRPMFGALGSARHHCRLTFLSQAAAANGVAERLNLRSAIAVVKG
CRTVQKADMVHNSLQPNITVDAQTYEVRVDGELITSEPADVLPMAQRYFL
F
Ligand information
Ligand IDNI
InChIInChI=1S/Ni/q+2
InChIKeyVEQPNABPJHWNSG-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ni++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ni+2]
FormulaNi
NameNICKEL (II) ION
ChEMBL
DrugBankDB14204
ZINC
PDB chain1fwi Chain C Residue 574 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB1fwi Characterization of the mononickel metallocenter in H134A mutant urease.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		K217 H246 H272
Binding residue
(residue number reindexed from 1)		K216 H245 H271
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) A134 H136 K217 H219 D221 H246 H272 R336 D360
Catalytic site (residue number reindexed from 1) A133 H135 K216 H218 D220 H245 H271 R320 D344
Enzyme Commision number 3.5.1.5: urease.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0009039 urease activity
GO:0016151 nickel cation binding
GO:0016787 hydrolase activity
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0046872 metal ion binding
Biological Process
GO:0043419 urea catabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:1fwi, PDBe:1fwi, PDBj:1fwi
PDBsum1fwi
PubMed8702515
UniProtP18314|URE1_KLEAE Urease subunit alpha (Gene Name=ureC)

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