Structure of PDB 1d9k Chain C Binding Site BS01

Receptor Information
>1d9k Chain C (length=183) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IEADHVGSYGITVYQSPGDIGQYTFEFDGDELFYVDLDKKETVWMLPEFA
QLRRFEPQGGLQNIATGKHNLEILTKRSNSTPATNEAPQATVFPKSPVLL
GQPNTLICFVDNIFPPVINITWLRNSKSVTDGVYETSFFVNRDYSFHKLS
YLTFIPSDDDIYDCKVEHWGLEEPVLKHWEPEI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB1d9k The crystal structure of a T cell receptor in complex with peptide and MHC class II.
Resolution3.2 Å
Binding residue
(original residue number in PDB)		Y9 T11 F24 L51 R52 R53 N62 T65 G66 H68 N69 I72
Binding residue
(residue number reindexed from 1)		Y9 T12 F25 L52 R53 R54 N63 T66 G67 H69 N70 I73
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006955 immune response
GO:0019882 antigen processing and presentation
Cellular Component
GO:0016020 membrane
GO:0042613 MHC class II protein complex

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Biological Process
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Cellular Component
External links
PDB RCSB:1d9k, PDBe:1d9k, PDBj:1d9k
PDBsum1d9k
PubMed10583947
UniProtP01910|HA2K_MOUSE H-2 class II histocompatibility antigen, A-K alpha chain (Gene Name=H2-Aa)

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