Structure of PDB 7o81 Chain Bo Binding Site BS01

Receptor Information
>7o81 Chain Bo (length=105) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQGKRRYDRKQSGYGGQ
TKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKG
QVIQF
Ligand information
>7o81 Chain AT (length=75) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggcucguuggucuagggguaugauucucgcuuagggugcgagaggucccg
gguucaaaucccggacgagccccca
<<<<<<<...<<.........>><<<<<<<.......>>>>>>>...<<<
<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB7o81 Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		Y41 X53 P54 F56
Binding residue
(residue number reindexed from 1)		Y40 X52 P53 F55
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7o81, PDBe:7o81, PDBj:7o81
PDBsum7o81
PubMed34029205
UniProtG1T040|RL36A_RABIT Large ribosomal subunit protein eL42 (Gene Name=RPL36A)

[Back to BioLiP]