Structure of PDB 8jiw Chain Bg Binding Site BS01

Receptor Information
>8jiw Chain Bg (length=271) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LALVGTMRGHNDVVTAIAAPIDNSPYIVSGSRDKSLLVWRRLTGHGHFVQ
DVVISSDGQFALSGSWDGELRLWDLSTGLTTRRFVGHTKDVISVAFSVDN
RQIVSASRDNTIKLWNTLGECKYTIWVSCVRFSPPTIVSGSWDKTVKVWN
LTNCKLRSTLAGHGGYVNAVAVSPDGSLCASGGKDGVTLLWDLSEGKRLY
QLEAGSIIHALCFSPNRYWLCAATEESVKIWDLSKHVVLKNQMLYCTSLS
WSADGSTLYTGYTDGTIRVFK
Ligand information
>8jiw Chain Ad (length=1571) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugugcaaguaugaaccaaugaacugugaaacugcgaauggcucau
uaaaucaguuauaguuuguuugaugguacguacucggauaaccguaguaa
uucuagagcuaauacgugcaacaaaccccgacugggcgcauuuauuagau
augauccgaugauucaugauaacucgacggaucgcacggccgccggcgac
gcaucauucaaauuucugcccuaucaacuuucgaugguaggauaggggcc
uaccaugguggugacgggugacggagaauuaggguucgauuccggagagg
gagccugagaaacggcuaccacauccaaggaaggcagcaggcgcgcaaau
uacccaauccugacacggggagguagugacaauaaauaacaauaccgggu
gucugguaauuggaaugaguacaaucuaaaucccuuaacgaggauccauu
ggagggcaagucuggugccagcagccgcgguaauuccagcuccaauagcg
uauauuuaaguuguugcaguuaaaaagcucguaguuggaccuugggccgg
caucguuacuuugaagaaauuagagugcucaaagcaagccaucgcucugg
auacauuagcaugggauaacaucauaggauuccaugaguaaugauuaaua
gggacagucgggggcauucguauuucauagucagaggugaaauucuugga
uuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauu
aaucaagaacgaaaguugggggcucgaagacgaucagauaccguccuagu
cucaaccauaaacgaugccgaccagggaucggcggauguugcaggacucc
gccggcaccuuaugagaaaucaaagucuuuggguuccggggggaguaugg
ucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggcgug
gagccugcguuugaccaacacggggaaacuuaccgguccagacaagcaga
cugagagcucuuucuaugggugguggugcauggguucuuaguugguggag
cgauuugucugguuaauuccguuaacgaacgagaccucagccugcuaacu
agcuaugcggagcccuccgcagcuagcuucuuagagggacuaucgccguu
uaggcgacggaaguuugaggcaauaacaggucugugaugcccuuagaugu
ucugggccgcacgcgcgcuacacugauguauucaacgaguauauagccuu
ggccgacaggcccggguaaucuuggaauuucaucgugauggggauagauc
auugcaauuggucuucaacgaggaaugccuaguaagcgcgagucaucacu
cgcguugacuacgucccugcccuuuguacacaccgcccgucgcuccuacc
gauugaaugguccggugaaguguucggaucgcggucgcgagaaguccauu
gaaccuuaucauuuagaggaaggagaagucguaacaagguuuccguaggu
gaaccugcggaaggaucauug
...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<<<.........<<.....<..<<<...
..>>>..>......>>.........<<<.....>>>.....<<<<<<...
................>>>>>>.........<<<<.<<<<.>>>>>>>>.
.>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>
>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<
.<<<..........>>>.>>.<.<<....>>.>...>>>>>>........
.<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<.
.>>>>>>>.>>>......<<<.<...........>>.>>.........<<
<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>
>>>>>>..........<.<((.....<.<<...<<<.<............
....<<<<<<.<<.......<<...<.......>..<<<....>>>....
.>>......>>.>>..>>>>........<<<<...>>>>......>....
<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>.....
.>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...
>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>
>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<....>>>>>>
>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<
<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<.
.<<<.<<<<..<<.......>>..........<<<<......<<<<.<<.
.......>>....>>.>>...<<.<<<..<<.........<<<.<<<<..
....>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..
<<<<.<<<<<<<..>>>>>>>...>>>>..>>>>.>>.....<<<<<...
..>>>>>........>>>>>................>>>>>>>.......
>>.>>......>>>>.>>>.....<<<<.<.......<<.......<<<.
<<<<....>>>>.>>>....>>......>.>>>>......<....<<<<<
<.......>>>>>>....>.....>>>>>>....<<<<<<<<......>>
>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<
....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>
..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<.
...>>>>>>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8jiw Cryo-EM structure of wheat ribosome reveals unique features of the plant ribosomes.
Resolution2.88 Å
Binding residue
(original residue number in PDB)		T72 G73 G75 H76 R100 R112 N307 Q308
Binding residue
(residue number reindexed from 1)		T43 G44 G46 H47 R71 R83 N241 Q242
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005080 protein kinase C binding
GO:0043022 ribosome binding
GO:0045182 translation regulator activity
Biological Process
GO:0006417 regulation of translation
GO:0072344 rescue of stalled ribosome
Cellular Component
GO:0005634 nucleus
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8jiw, PDBe:8jiw, PDBj:8jiw
PDBsum8jiw
PubMed38458197
UniProtA0A3B5Z4Q0

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