Structure of PDB 8a22 Chain Bc Binding Site BS01

Receptor Information
>8a22 Chain Bc (length=289) Species: 353565 (Polytomella magna) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NNPNPPQIRLLDLVVQRERLRPKNPRDIELLSAEQTDLAKTLITPPTEEG
AEPPAAPQLAGLKQVGLPLNQRDVVSVLHQSLSNAVGQNVHFRPFFFSNL
FQSAPAVAQYVAHALETGSAWNRVERFFVSSVEGDPNLLGMQVQVKGRLG
TKAGKGMKKHWKYGDLDIFTIHDYVDYGRATAFTRMGAIGVRVWLKYKPE
AVKDVYFQRQTNFTMPLSKLLSMPRPPLPLSVDGATSSCWWTRPAPLQPP
ENLTEQSFASGCAGYDPATRKLRDPQEIKALLEELDRRE
Ligand information
>8a22 Chain B4 (length=332) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aaaccacgguauugcauggcugauauauaauccauacaaaggauauaacc
aaguagcauggucuuauauugugggcuggcggugugcuacaaguaacaaa
aaguacaaccggauuaauuacugaaaucauaaauauaaagagggaaucgc
uaguaaucuuuauuauaacauaaaggugaacuagugugcacacacugccc
gucacauccgggaaaaccacaaagcccuaaguuuguauaguguuuaauaa
accaauucaaacauaagcuuauuguuaacaaggaugaagucguaacaagg
uuugcguaggggaaccugcucaagauuaugcu
.......<<.<<...<<<<<<.....<<<.<<<.......>>>>>>....
.>>>..>>>.>>>>...............................<<...
..>>.....<....<<.<<<.........>>>.>>....>..........
.....<<<<<<<<......>>>>>>>>...................<..<
<.<.<<<<<..<..<<<.<..<<<<....<<<<<<.<<.<.<<.......
>>>.>>.>>>>>.>..>>>>.>.>>>..>..>>>>>..>.>>...>....
.<<<.<<<<<....>>>>>.>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8a22 Structure of a mitochondrial ribosome with fragmented rRNA in complex with membrane-targeting elements.
Resolution2.91 Å
Binding residue
(original residue number in PDB)		R17 R21 K146 R148 K155 F169 H172 R185 M186 A188 R192 R209
Binding residue
(residue number reindexed from 1)		R17 R21 K146 R148 K155 F169 H172 R185 M186 A188 R192 R209
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 15 17:28:09 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8a22', asym_id = 'Bc', bs = 'BS01', title = 'Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8a22', asym_id='Bc', bs='BS01', title='Structure of a mitochondrial ribosome with fragm...rRNA in complex with membrane-targeting elements.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003735,0006412', uniprot = '', pdbid = '8a22', asym_id = 'Bc'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003735,0006412', uniprot='', pdbid='8a22', asym_id='Bc')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>