Structure of PDB 7zrs Chain BV Binding Site BS01

Receptor Information
>7zrs Chain BV (length=126) Species: 4932 (Saccharomyces cerevisiae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIA
WTVLFRKHHKKGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEV
RKAQREEKQKADKEKKKAAKAARKAE
Ligand information
>7zrs Chain 5 (length=3185) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uugaccucaaaucagguaggaguacccgcugaacuuaagcauaucaauaa
gcggaggaaaagaaaccaaccgggauugccuuaguaacggcgagugaagc
ggcaaaagcucaaauuugaaaucugguaccuucggugcccgaguuguaau
uuggagagggcaacuuuggggccguuccuugucuauguuccuuggaacag
gacgucauagagggugagaaucccguguggcgaggagugcgguucuuugu
aaagugccuucgaagagucgaguuguuugggaaugcagcucuaagugggu
gguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaa
guacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaagua
cgugaaauuguugaaagggaagggcauuugaucagacaugguguuuugua
uuucacugggccagcaucaguuuugguggcaggauaaauccauaggaaug
uagcuugccucgguaaguauuauagccugugggaauacugccagcuggga
cugaggacugcgacguaagucaaggaugcuggcauaaugguuauaugccg
cccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuugg
guguaaaacccauacgcguaaugaaagugaacguagguuggggccucgca
agaggugcacaaucgaccgauccugaugucuucggauggauuugaguaag
agcauagcuguugggacccgaaagauggugaacuaugccugaauagggug
aagccagaggaaacucugguggaggcucguagcgguucugacgugcaaau
cgaucgucgaauuuggguauaggggcgaaagacuaaucgaaccaucuagu
agcugguuccugccgaaguuucccucaggauagcagaagcucguaucagu
uuuaugagguaaagcgaaugauuagagguuccggggucgaaaugaccuug
accuauucucaaacuuuaaauauguaagaaguccuuguuacuuaauugaa
cguggacauuugaaugaagagcuuuuagugggccauuuuugguaagcaga
acuggcgaugcgggaugaaccgaacguagaguuaaggugccggaauacac
gcucaucagacaccacaaaagguguuaguucaucuagacagccggacggu
ggccauggaagucggaauccgcuaaggaguguguaacaacucaccggccg
aaugaacuagcccugaaaauggauggcgcucaagcguguuaccuauacuc
uaccgucaggguugauaugaugcccugacgaguaggcaggcguggagguc
agugacgaagccuagaccguaaggucgggucgaacggccucuagugcaga
ucuuggugguaguagcaaauauucaaaugagaacuuugaagacugaagug
gggaaagguuccacgucaacagcaguuggacguggguuagucgauccuaa
gagauggggaagcuccguuucaaaggccugauuuuaugcaggccaccauc
gaaagggaauccgguuaagauuccggaaccuggauauggauucuucacgg
uaacguaacugaauguggagacgucggcgcgagcccugggaggaguuauc
uuuucuucuuaacagcuuaucaccccggaauugguuuauccggagauggg
gucuuauggcuggaagaggccagcaccuuugcuggcuccggugcgcuugu
gacggcccgugaaaauccacaggaaggaauaguuuucaugccaggucgua
cugauaaccgcagcaggucuccaaggugaacagccucuaguugauagaau
aauguagauaagggaagucggcaaaauagauccguaacuucgggauaagg
auuggcucuaagggucggguacgaucaacuuagaacugguacggacaagg
ggaaucugacugucuaauuaaaacauagcauugcgauggucagaaaguga
uguugacgcaaugugauuucugcccagugcucugaaugucaaagugaaga
aauucaaccaagcgcggguaaacggcgggaguaacuaugacucucuuaag
guagccaaaugccucgucaucuaauuagugacgcgcaugaauggauuaac
gagauucccacugucccuaucuacuaucuagcgaaaccacagccaaggga
acgggcuuggcagaaucagcggggaaagaagacccuguugagcuugacuc
uaguuugacauugugaagagacauagagggcuaccuuuauaguuucuuua
cuuauucaaugaagcggagcuggaauucauuuuccacguucuagcauuca
aggucccauucggggcugauccggguugaagacauugucagguggggagu
uuggcuggggcggcacaucuguuaaacgauaacgcagauguccuaagggg
ggcucauggagaacagaaaucuccaguagaacaaaaggguaaaagccccc
uugauuuugauuuucagugugaauacaaaccaugaaaguguggccuaucg
auccuuuagucccucggaauuugaggcuagaggugccagaaaaguuacca
cagggauaacuggcuuguggcagucaagcguucauagcgacauugcuuuu
ugauucuucgaugucggcucuuccuaucauaccgaagcagaauucgguaa
gcguuggauuguucacccacuaauagggaacgugagcuggguuuagaccg
ucgugagacagguuaguuuuacccuacugaugaauguuaccgcaauagua
auugaacuuaguacgagaggaacaguucauucggauaauugguuuuugcg
gcugucugaucaggcauugccgcgaagcuaccauccgcuggauuauggcu
gaacgccucuaagucagaauccaugcuagaacgcggugauuucuuugcuc
cacacaauauagauggauacgaauaaggcguccuuguggcgucgcugaac
cauagcaggcuagcaacggugcacuuggcggaaaggccuugggugcuugc
uggcgaauugcaaugucauuuugcguggggauaaaucauuuguauacgac
uuagauguacaacgggguauuguaagcaguagaguagccuuguuguuacg
aucugcugagauuaagccuuuguugucugauuugu
........................<<<<<<.....<......>......>
>>>>.>.........<<....>>..<<<<<......<<.....>>.....
>>>>>..[[[...........<<.<<<<<<...>>>>>>.>>........
.....<<<<<<.<<<<<<<<<<<<<<<<<<<<<<....<<<<......>>
>>.(.......<<<......)>>>..>.>>>>>>>>..>>>>>>>>....
>>>>>>>>>>>........<<<<<<<........>>>>>>>.....((((
(..<<<<<<)))))..]]]...............................
...<<....>>...............<<<<....>>>>............
......................<<<<<.<<<<<.................
.........<<<<<<<.<<<<<<<<<<<<<<<.....<<<<<<<<<....
..<<<<<......>>>>>.......>>>>>>>.>.>.>>>>>.>>>>>>>
>>>........<<<....>>>.....>>>>>>>.....>>>>>.>>>>>.
.<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<...<<
<<.....>>>>...>>>...<<....>>.......<<<<<..<<<<<...
.>>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>...
.>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<..
..<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>
>>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>
..>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<....<<.<
<<<<<<.....<<<....<<<..<.<<<<...<<<<<.......>>>>>.
>>>>.>..>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>
>>.>>>>.....>>>>..>>>>>>>>.>>..<<<<.<<<<<.....>>>>
>.>>>>....<<<......>>>...<<<<<<<..<<<<(((.....<<<<
<<.....<<..........<<<.<<<<<<<<<<.......<<<<<.<<..
..<<.........>>....>>.........<<......>>...>>>>>..
.>>>>>>>>>>>>>..........))).>>...>>>>>>.>>>>..>>>>
>>><<<<<<<<<.........>>>>>>>>>....>>>>>><.<<<<<<<<
.<<......<<<<.<<<<....>>>>>>>>...>>>>>>>>>>..>....
.>>>>>><<.....<<.....<<<<<<.......>>>>>><<<<.....<
<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<<<...
<<....<<<....>>>........<<<.<<........>.>>>>....>>
....>>...<<<<<........>>>>>))<<<<.<<<<<.<.....<<<.
...>>>.......<<<<<<...<<<<.<<<<<<<<<<<<<<<<<<..{{{
..>>>>>><...<<<<<....<<<<<<....<<<.....>>>....>>>>
>>.....>>>>>....><<<<<<<......>>>>>>>>>>>.>.>>>>>>
>.>>>>.........>>>>>>..........>.>..>>>>>>>>>>>>..
>>.....<<......>>>>>>>.<<<<.....>>>>..>>>>..<<<<..
...<<<<<<<.<<.........<.....<<<<<....<<..>>.....>>
>>><<.<<<<<<<<<<<....>>>>>..>>>>>>.>>............<
<<<<<<<<..<<<.........>>>..<<<<<<<....<<<<.....>>>
>......>>>>>>>...<<..<<<..<<<<<<.....<<.....<<<<..
..>>>>.....>>..>>>>..>>>>><<<<<<.......>>>>>>.....
...<...........<<<<<.......>>>>>.....>.....>>....>
>.>>>>>>>..>..>>.>>>>>>>..>>>>>>....>>....<<<<<...
.....>>>>>....[[[[[..{{{.{{......[[[[.{{[[[[..<<<<
<.<<<<<<<<..<<<<<<<<<<<<<<<<<....>>>>>>>.>>>>>>>>>
>...<<<<<.....<<<<..<<<<<......>>>>>..............
.<<<<<<....>>>>>>..>>>>..>>>>>.....>>>>>>>>..>>>>>
...<<<.....>>>..<<<<<<...........>>>>>>..<<...<<<<
<<<...<<<<<<.......>>>>>>.....<<...(((>>....>>>>>>
>...<<<.<<<<<.......>>>>.>>>>.<<<....>>>.>>)))....
...((((((..((((.>>>>>>))))))))))..........]]]]..}}
]]]].......<<.<.<.<<<<<<...<<.......>>...>>>>>>...
>>.>.>.......<<<<<.<<<<<<..<.<<<<<<<......>>>>>>>.
..>.<<<.........>>>.....>>>>>..>...>>>.>>....<<<<<
<<....>>>.>>>>....}}..}}}.]]]]]....<<<<<<<<..<<<<.
<.<<<<<<...............>>>>>>.><<<<<...<<<<....<<<
<<<<<<<}}}.>>>>>..>>>>>...>>>>..>>>>>.<<<<...<<<<<
...........>>>>>...>>>>.>>>>....>>>>>>>>.......<<<
<<<.<<<.<<....<<..........<<<<<<.....>>>>>>......>
>.......<<<<<<...<<<<<.<..<<<......>>>..>.>>>>>.>>
>>>>.............>>.>>>.>>>>>>..<<<<<.<...........
..>.....<<<<<<<<<.<<<....<<<<....<<<<<......>>>>>.
..>>>>...>>>....>>>>.>>>>>..>>>>>..
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7zrs Structural basis for clearing of ribosome collisions by the RQT complex.
Resolution4.8 Å
Binding residue
(original residue number in PDB)
G16 G18 S34 K35 S38 Q42 K44 I49 A50 W51 R56 K61
Binding residue
(residue number reindexed from 1)
G16 G18 S34 K35 S38 Q42 K44 I49 A50 W51 R56 K61
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:7zrs, PDBe:7zrs, PDBj:7zrs
PDBsum7zrs
PubMed36801861
UniProtP04449|RL24A_YEAST Large ribosomal subunit protein eL24A (Gene Name=RPL24A)

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