Structure of PDB 8jiw Chain BT Binding Site BS01

Receptor Information
>8jiw Chain BT (length=137) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TARTVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPSDAD
WYYIRAASMARKIYLRQGIGIGGFQKIYGGRQRNGSRPPHFCKSSGAVSR
NILQELQKMGIIDVDPKGGRLITSQGRRDLDQVAGTV
Ligand information
>8jiw Chain Ad (length=1571) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugugcaaguaugaaccaaugaacugugaaacugcgaauggcucau
uaaaucaguuauaguuuguuugaugguacguacucggauaaccguaguaa
uucuagagcuaauacgugcaacaaaccccgacugggcgcauuuauuagau
augauccgaugauucaugauaacucgacggaucgcacggccgccggcgac
gcaucauucaaauuucugcccuaucaacuuucgaugguaggauaggggcc
uaccaugguggugacgggugacggagaauuaggguucgauuccggagagg
gagccugagaaacggcuaccacauccaaggaaggcagcaggcgcgcaaau
uacccaauccugacacggggagguagugacaauaaauaacaauaccgggu
gucugguaauuggaaugaguacaaucuaaaucccuuaacgaggauccauu
ggagggcaagucuggugccagcagccgcgguaauuccagcuccaauagcg
uauauuuaaguuguugcaguuaaaaagcucguaguuggaccuugggccgg
caucguuacuuugaagaaauuagagugcucaaagcaagccaucgcucugg
auacauuagcaugggauaacaucauaggauuccaugaguaaugauuaaua
gggacagucgggggcauucguauuucauagucagaggugaaauucuugga
uuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauu
aaucaagaacgaaaguugggggcucgaagacgaucagauaccguccuagu
cucaaccauaaacgaugccgaccagggaucggcggauguugcaggacucc
gccggcaccuuaugagaaaucaaagucuuuggguuccggggggaguaugg
ucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggcgug
gagccugcguuugaccaacacggggaaacuuaccgguccagacaagcaga
cugagagcucuuucuaugggugguggugcauggguucuuaguugguggag
cgauuugucugguuaauuccguuaacgaacgagaccucagccugcuaacu
agcuaugcggagcccuccgcagcuagcuucuuagagggacuaucgccguu
uaggcgacggaaguuugaggcaauaacaggucugugaugcccuuagaugu
ucugggccgcacgcgcgcuacacugauguauucaacgaguauauagccuu
ggccgacaggcccggguaaucuuggaauuucaucgugauggggauagauc
auugcaauuggucuucaacgaggaaugccuaguaagcgcgagucaucacu
cgcguugacuacgucccugcccuuuguacacaccgcccgucgcuccuacc
gauugaaugguccggugaaguguucggaucgcggucgcgagaaguccauu
gaaccuuaucauuuagaggaaggagaagucguaacaagguuuccguaggu
gaaccugcggaaggaucauug
...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<<<.........<<.....<..<<<...
..>>>..>......>>.........<<<.....>>>.....<<<<<<...
................>>>>>>.........<<<<.<<<<.>>>>>>>>.
.>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>
>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<
.<<<..........>>>.>>.<.<<....>>.>...>>>>>>........
.<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<.
.>>>>>>>.>>>......<<<.<...........>>.>>.........<<
<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>
>>>>>>..........<.<((.....<.<<...<<<.<............
....<<<<<<.<<.......<<...<.......>..<<<....>>>....
.>>......>>.>>..>>>>........<<<<...>>>>......>....
<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>.....
.>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...
>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>
>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<....>>>>>>
>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<
<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<.
.<<<.<<<<..<<.......>>..........<<<<......<<<<.<<.
.......>>....>>.>>...<<.<<<..<<.........<<<.<<<<..
....>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..
<<<<.<<<<<<<..>>>>>>>...>>>>..>>>>.>>.....<<<<<...
..>>>>>........>>>>>................>>>>>>>.......
>>.>>......>>>>.>>>.....<<<<.<.......<<.......<<<.
<<<<....>>>>.>>>....>>......>.>>>>......<....<<<<<
<.......>>>>>>....>.....>>>>>>....<<<<<<<<......>>
>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<
....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>
..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<.
...>>>>>>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8jiw Cryo-EM structure of wheat ribosome reveals unique features of the plant ribosomes.
Resolution2.88 Å
Binding residue
(original residue number in PDB)		K8 H13 W34 V38 K39 R42 K44 L46 P48 R57 S60 R63 K64 R68 G72 I73 R83 Q84 R85 G87 S88 R89 P90 P91 H92 F93 S97 G98 A99 R102 Q106 G120 G121 R122 S126 R129 R130 D133
Binding residue
(residue number reindexed from 1)		K6 H11 W32 V36 K37 R40 K42 L44 P46 R55 S58 R61 K62 R66 G70 I71 R81 Q82 R83 G85 S86 R87 P88 P89 H90 F91 S95 G96 A97 R100 Q104 G118 G119 R120 S124 R127 R128 D131
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8jiw, PDBe:8jiw, PDBj:8jiw
PDBsum8jiw
PubMed38458197
UniProtW5FWF5

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