Structure of PDB 8jiw Chain BS Binding Site BS01

Receptor Information
>8jiw Chain BS (length=100) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKQKIMFALTSIKGVGRRFSNIVCKKADIDMNKRAGELSAEEMDRLMAVV
HNPRQFKVPDWFLNRKKDYGRFSQRLKKIRNHRGLRRVRGQHTKTTGRRG
Ligand information
>8jiw Chain Ad (length=1571) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugugcaaguaugaaccaaugaacugugaaacugcgaauggcucau
uaaaucaguuauaguuuguuugaugguacguacucggauaaccguaguaa
uucuagagcuaauacgugcaacaaaccccgacugggcgcauuuauuagau
augauccgaugauucaugauaacucgacggaucgcacggccgccggcgac
gcaucauucaaauuucugcccuaucaacuuucgaugguaggauaggggcc
uaccaugguggugacgggugacggagaauuaggguucgauuccggagagg
gagccugagaaacggcuaccacauccaaggaaggcagcaggcgcgcaaau
uacccaauccugacacggggagguagugacaauaaauaacaauaccgggu
gucugguaauuggaaugaguacaaucuaaaucccuuaacgaggauccauu
ggagggcaagucuggugccagcagccgcgguaauuccagcuccaauagcg
uauauuuaaguuguugcaguuaaaaagcucguaguuggaccuugggccgg
caucguuacuuugaagaaauuagagugcucaaagcaagccaucgcucugg
auacauuagcaugggauaacaucauaggauuccaugaguaaugauuaaua
gggacagucgggggcauucguauuucauagucagaggugaaauucuugga
uuuaugaaagacgaacaacugcgaaagcauuugccaaggauguuuucauu
aaucaagaacgaaaguugggggcucgaagacgaucagauaccguccuagu
cucaaccauaaacgaugccgaccagggaucggcggauguugcaggacucc
gccggcaccuuaugagaaaucaaagucuuuggguuccggggggaguaugg
ucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggcgug
gagccugcguuugaccaacacggggaaacuuaccgguccagacaagcaga
cugagagcucuuucuaugggugguggugcauggguucuuaguugguggag
cgauuugucugguuaauuccguuaacgaacgagaccucagccugcuaacu
agcuaugcggagcccuccgcagcuagcuucuuagagggacuaucgccguu
uaggcgacggaaguuugaggcaauaacaggucugugaugcccuuagaugu
ucugggccgcacgcgcgcuacacugauguauucaacgaguauauagccuu
ggccgacaggcccggguaaucuuggaauuucaucgugauggggauagauc
auugcaauuggucuucaacgaggaaugccuaguaagcgcgagucaucacu
cgcguugacuacgucccugcccuuuguacacaccgcccgucgcuccuacc
gauugaaugguccggugaaguguucggaucgcggucgcgagaaguccauu
gaaccuuaucauuuagaggaaggagaagucguaacaagguuuccguaggu
gaaccugcggaaggaucauug
...<<<<<.[.((((>>>>>.<<<.<<<<<<...<.<...<......<<<
.<<<..<<....<<....<<.........>>...>>.>>......<<...
.....<<<..<<..<<....<<<<<.........<<.....<..<<<...
..>>>..>......>>.........<<<.....>>>.....<<<<<<...
................>>>>>>.........<<<<.<<<<.>>>>>>>>.
.>>>>>...>>>>..>>>.<<<....<<<....<<<<<<<<.......>>
>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<
.<<<..........>>>.>>.<.<<....>>.>...>>>>>>........
.<<<....<<<.....>>>..>>>..>....>.>.....<<<<<<<<<<.
.>>>>>>>.>>>......<<<.<...........>>.>>.........<<
<<<((......<<<<.....<<..))>>.......>>>>.>>>>>..>>>
>>>>>>..........<.<((.....<.<<...<<<.<............
....<<<<<<.<<.......<<...<.......>..<<<....>>>....
.>>......>>.>>..>>>>........<<<<...>>>>......>....
<<<<<<.<<...<<<<..<<..<<<<<<<<...<<<......>>>.....
.>>>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...
>>>...>>.>....<<<<<<<...<...<<<<.........>>>>...>>
>>>>>>..........<<<.<<.<<<..<<<<<<<<.<<<....>>>>>>
>>>>>..>>>...<<..))>>...>>.....>>>.>.>.<<<......<<
<<....>>>>....>>>..)))).]<<<<<.<<<<<<<..<<.<<<<<<.
.<<<.<<<<..<<.......>>..........<<<<......<<<<.<<.
.......>>....>>.>>...<<.<<<..<<.........<<<.<<<<..
....>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<<..
<<<<.<<<<<<<..>>>>>>>...>>>>..>>>>.>>.....<<<<<...
..>>>>>........>>>>>................>>>>>>>.......
>>.>>......>>>>.>>>.....<<<<.<.......<<.......<<<.
<<<<....>>>>.>>>....>>......>.>>>>......<....<<<<<
<.......>>>>>>....>.....>>>>>>....<<<<<<<<......>>
>>>>>>......>>...>>>>>>>>>>.>>....<..<<.<.<<<<<.<<
....<<<<<<<..<<<..<<<<..<...<<<<<..>>>>>...>..>>>>
..>>>..>>>>>>>...>>.>>>>>..>.>>...>.....<<<<<<<<<.
...>>>>>>>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8jiw Cryo-EM structure of wheat ribosome reveals unique features of the plant ribosomes.
Resolution2.88 Å
Binding residue
(original residue number in PDB)		K25 F28 G35 G37 R38 R39 R55 W82 F83 N85 R86 K87 K88 Y90 R121 R130 R132 Q134 H135 T136 K137 T138 T139 G140 R141 R142 G143
Binding residue
(residue number reindexed from 1)		K4 F7 G14 G16 R17 R18 R34 W61 F62 N64 R65 K66 K67 Y69 R83 R87 R89 Q91 H92 T93 K94 T95 T96 G97 R98 R99 G100
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:8jiw, PDBe:8jiw, PDBj:8jiw
PDBsum8jiw
PubMed38458197
UniProtA0A3B6TWW5

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