Structure of PDB 4v7e Chain BS Binding Site BS01

Receptor Information
>4v7e Chain BS (length=152) Species: 4565 (Triticum aestivum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSLIAGEEFQHILRVLNTNVDGKQKIMFALTSIKGVGRRFSNIVCKKADI
DMNKRAGELSAEEMDRLMAVVHNPRQFKVPDWFLNRKKDYKDGRFSQVVS
NAVDMKLRDDLERLKKIRNHRGLRHYWGVRVRGQHTKTTGRRGKTVGVSK
KR
Ligand information
>4v7e Chain Ad (length=1762) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uaccugguugauccugccaguagucauaugcuugucucaaagauuaagcc
augcaugugcaaguaugaaccaauuugaacugugaaacugcgaauggcuc
auuaaaucaguuauaguuuguuugaugguacgugcuacucggauaaccgu
aguaauucuagagcuaauacgugcaacaaaccccgacuucugggaggggc
gcauuuauuagauaaaaggcugacgcgggcucugcucgcugauccgauga
uucaugauaacucgacggaucgcacggccuucgugccggcgacgcaucau
ucaaauuucugcccuaucaacuuucgaugguaggauaggggccuaccaug
guggugacgggugacggagaauuaggguucgauuccggagagggagccug
agaaacggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaa
uccugacacggggagguagugacaauaaauaacaauaccgggcgcauuag
ugucugguaauuggaaugaguacaaucuaaaucccuuaacgaggauccau
uggagggcaagucuggugccagcagccgcgguaauuccagcuccaauagc
guauauuuaaguuguugcaguuaaaaagcucguaguuggaccuugggccg
gccggcaucgcgcuccuagccuuaauuggccgggucguguuuccggcauc
guuacuuugaagaaauuagagugcucaaagcaagccaucgcucuggauac
auuagcaugggauaacaucauaggauuccgguccuauuguguuggccuuc
gggaucggaguaaugauuaauagggacagucgggggcauucguauuucau
agucagaggugaaauucuuggauuuaugaaagacgaacaacugcgaaagc
auuugccaaggauguuuucauuaaucaagaacgaaaguugggggcucgaa
gacgaucagauaccguccuagucucaaccauaaacgaugccgaccaggga
ucggcggauguugcuuauaggacuccgccggcaccuuaugagaaaucaaa
gucuuuggguuccggggggaguauggucgcaaggcugaaacuuaaaggaa
uugacggaagggcaccaccaggcguggagccugcgcuuaauuugacucaa
cacggggaaacuuaccagguccagacauagcaaggauugacagacugaga
gcucuuucuugauucuaugggugguggugcauggccguucuuaguuggug
gagcgauuugucugguuaauuccguuaacgaacgagaccucagccugcua
acuagcuaugcggagccaucccuccgcagcuagcuucuuagagggacuau
ggccguuuaggccacggaaguuugaggcaauaacaggucugucaugcccu
uagauguucugggccgcacgcgcgcuacacugauguauucaacgaguaua
uagccuuggccgacaggcccggguaaucuugggaaauuucaucgugaugg
ggauagaucauugcaauuguuggucuucaacgaggaaugccuaguaagcg
cgagucaucagcucgcguugacuacgucccugcccuuuguacacaccgcc
cgucgcuccuaccgauugaaugguccggugaaguguucggaucgcggcga
cgggggcgguucgccgcccccgacgucgcgagaaguccauugaaccuuau
cauuuagaggaagcagaagucguaacaagguuuccguaggugaaccugcg
gaaggaucauug
...<<<<....[[[[.>>>>.<<<.<<<<<<...<.<<..<......<<<
.<<<..<<...<<.....<<...........>>....>>>>......<<.
.......<<<..<<..<<....<<<<<............<<.....<..<
<<.....>>>..>......>>..........<<<............>>>.
<...<..<<<.....[[[.(((((<<<.........>>>...........
....>>>.>......>........<<<<......>>>.>.....>>>>>.
..>>>>..>>>.<<<....<<<....<<<<<<<<.......>>>>>>>>>
>>......>>>...<<<.<<<<....>>>>....>>>.>>.<<.<<<...
.......>>>.>>...<<....>>.....>>>>>>.........<<<...
.<<<.....>>>..>>>..>>...>.>.....<<.<<.<<..........
....>>.>>..>>......<<.................>>.........<
<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>..>>
>>>>>>>..........<.<{{.....<.<<...<<<.<.....<.<<<<
..>>>>.>...<..............<<<.....>>>............>
<<<<<<.<<.......<<...<.......>...<.......>.....>>.
.....>>.>>..>>>>.........<<<<<<<<<<.....))))).]]].
>>>>>>>>>>.......>....<<<<<<.<<...<<<<..<<..<<<<<<
<<...<<<......>>>......>>>>>>>>..>>.......<<....>>
...>>>>...>>>>>.>>>...>>>...>>.>....<<<<<<<...<...
<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<..
<<<<<<<<.<<<........>>>>>>>>>>>..>>>...<<..}}>>...
>>.....>>>.>.>.<<<......<<<<....>>>>....>>>..]]]].
.<<<<<.<<<<<<<..<<.<<<<<<..<<<.<<<<.......<<......
..>>..........<<<<<.<....<<<<<........<<.<<<......
..>>>.>>......>>>>>...<<.<<<..<<.<<<<<<....<<<.<<<
<<....>>>...<<<......>>>...>>.>>>....<<<<<.<<..<<<
<..<<......<<<<......>>>>........>>..>>>>.>>.....<
<<<<.....>>>>>........>>>>>....>>>.>>>.....>>>>>>>
.....>.>>>>>......>>>>.>>>.....<<<<.<.......<<....
...<<<.<<<<....>>>>.>>>....>>........>.>>>>.......
....<<<<<<..........>>>>>>..........>>>>>>....<<<<
<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>....<..
<<.<..<.<<.<<....<<<<<<<..<<<..<<<<..<...<<...<<<.
<<<<<<<<<....>>>>>>>>>.>>>...>>...>..>>>>..>>>..>>
>>>>>...>>.>>.>...>.>>...>.....<<<<<<<<<....>>>>>>
>>>.........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4v7e Structures of the Sec61 complex engaged in nascent peptide translocation or membrane insertion.
Resolution5.5 Å
Binding residue
(original residue number in PDB)		Q24 K25 F28 G37 R38 R39 D110 L114 H120 R121 R124 H125 R130 V131 R132 G133 Q134 H135 T136 K137 T139 R141 R142 V148 S149 K150 K151 R152
Binding residue
(residue number reindexed from 1)		Q24 K25 F28 G37 R38 R39 D110 L114 H120 R121 R124 H125 R130 V131 R132 G133 Q134 H135 T136 K137 T139 R141 R142 V148 S149 K150 K151 R152
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
Biological Process
GO:0006412 translation
Cellular Component
GO:0005829 cytosol
GO:0005840 ribosome
GO:0015935 small ribosomal subunit
GO:1990904 ribonucleoprotein complex

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:4v7e, PDBe:4v7e, PDBj:4v7e
PDBsum4v7e
PubMed24499919
UniProtQ8L806

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