Structure of PDB 8oeq Chain BP Binding Site BS01 |
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| >8oeq Chain AS (length=3199)
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ugaccucaaaucagguaggacuacccgcugaacuuaagcauaucaauaag
cggaggaaaagaaaccaacagggauugccucaguagcggcgagugaagcg
gcaaaagcucaaauuugaaaucuggcgucuuuggcguccgaguuguaauu
ugaagaagguaucuuugggcccggcucuugucuauguuccuuggaacagg
acgucacagagggugagaaucccgugcgaugagaugacccgggucugugu
aaaguuccuucgacgagucgaguuguuugggaaugcagcucuaagugggu
gguaaauuccaucuaaagcuaaauauuggcgagagaccgauagcgaacaa
guacagugauggaaagaugaaaagaacuuugaaaagagagugaaaaagua
cgugaaauuguugaaagggaagggcuugagaucagacuugguauugcggu
uuaccgggccagcaucgguuuggagcggcaggauaauggcggaggaaugu
ggcacggcuucugcuguguguuauagccucugacgauacugccagccuag
accgaggacugcgguuuuuaccuaggauguuggcauaaugaucuuaaguc
gcccgucuugaaacacggaccaaggagucuaacgucuaugcgaguguuug
gguguaaaacccguacgcguaaugaaagugaacgaaggugggggcccauu
agggugcaccaucgaccgauccugauguguucggauggauuugaguaaga
gcauagcuguugggacccgaaagauggugaacuaugccugaauaggguga
agccagaggaaacucugguggaggcucguagcgguucugacgugcaaauc
gaucgucgaauuuggguauaggggcgaaagacuaaucgaaccaucuagua
gcugguuccugccgaaguuucccucaggauagcagaagcucguaucaguu
uuaugagguaaagcgaaugauuagaagucuugggguugaaaugaccuuaa
cuuauucucaaacuuuaaauauguaagaaguccuuguugcuuaauugaac
guggacaauugaaugaagagcuuuuagugggccauuuuugguaagcagaa
cuggcgaugcgggaugaaccgaacgugaaguuaaagugccggaaugcacg
cucaucagacaccacaaaagguguuaguucaucuagacagccggacggug
gccgcuaaggaguguguaaacucaccggccgaaugaacuagcccugaaaa
uggauggcgcucaagcgugcuacuuauacuucaccgugauugcuguuuug
acgcuuucacgaguaggcaggcguggaggucagugacgaagccuuugcug
uaaagcugggucgaacggccucuagugcagaucuuggugguaguagcaaa
uauucaaaugagaacuuugaagacugaaguggggaaagguuccaugucaa
cagcaguuggacauggguuagucgauccuaagagauggggaagcuccguu
ucaacgugcuugauuuuucaggccaaccaucgaaagggaauccgguuaaa
auuccggaacuuggauauggauucuucacggcaacguaacugaaugugga
gacgucggcgugagcccugggaggaguuaucuuuucuucuuaacagcuua
ucacccuggaauugguuuauccggagauggggucuuauggcuggaagagc
gcgguaauuuugccgcguccggugcgcuuacgacgguccuugaaaaucca
caggaaggaauaguuuucaugccaagucguacucauaaccgcagcagguc
uccaagguuaacagccucuaguugauagaauaauguagauaagggaaguc
ggcaaaauagauccguaacuucgggauaaggauuggcucuaaggaucggg
cacguuuaacgaucaacuuagaacugguacggacaaggggaaucugacug
ucuaauuaaaacauagcauugugauggucagaaagugauguugacacaau
gugauuucugcccagugcucugaaugucaaagugaagaaauucaaccaag
cgcggguaaacggcgggaguaacuaugacucucuuaagguagccaaaugc
cucgucaucuaauuagugacgcgcaugaauggauuaacgagauucccacu
gucccuaucuacuaucuagcgaaaccacagccaagggaacgggcuuggca
gaaucagcggggaaagaagacccuguugagcuugacucuaguuugacauu
gugaaaagacauggaggguguagaauaagugggagcuucggcgccgguga
aauaccacuaccucuauaguuuuuuuacuuauucaaugaagcggagcugg
aggucaaacuccacguucuagcauuaagcccucugggcgauccggguuga
agacauugucagguggggaguuuggcuggggcggcacaucuguuaaacga
uaacgcagguguccuaagggggacucauggagaacagaaaucuccaguag
aacaaaaggguaaaaguccccuugauuuugauuuucagugugaauacaaa
ccaugaaaguguggccuaucgauccuuuagucccucggaauuugaggcua
gaggugccagaaaaguuaccacagggauaacuggcuuguggcagucaagc
guucauagcgacauugcuuuuugauucuucgaugucggcucuuccuauca
uaccgaagcagaauucgguaagcguuggauuguucacccacuaauaggga
acgugagcuggguuuagaccgucgugagacagguuaguuuuacccuacug
augaauguuaucgcaauaguaauugaacuuaguacgagaggaaccguuca
uucagauaauugguuuuugcggcugucugaucaggcaacgccgcgaagcu
accaucugcuggauuauggcugaacgccucuaagucagaauccaugcuag
aacgcgaugauuuuugcccugcacauuuuagauggauacgaauaagacuu
uuuagucgcuggaccauagcaggcuggcaacggugcgcuuagcggaaagg
cuuugugcgcuugccggcggauagcaaugucaacaugcgcggggauaaau
ccuuugcauacgacuuagauguacaacggaguauuguaagcaguagagua
gccuuguuguuacgaucugcugagauuaagcucuuguugucugauuugu |
.......................<<<<<<.....<......>......>>
>>>.>.........<<....>>..<<<<<......<<.....>>.....>
>>>>..<<<...........<<.<<<<<<...>>>>>>.>>.........
....<<<<<...<<<<<<<<<<<<.<<<<<<<.....<<<<......>>>
>.(.......<<<......)>>>....>>>>>>>....>>>>>>>>....
>>>>..>>>>>........<<<<<<<........>>>>>>>.....<<<<
<..((((((>>>>>..>>>...............................
...<<....>>...............<<<<....>>>>............
......................<<<<<<<<<<<<.....<<.........
...>>..<<<<<<<.<<<<<<<<.<<<<<<<....<<.<<<<<<<.....
.<<<<<<......>>>>>>.......>>>>>>.>.>>.>>>>>.>>>>>>
>>>>........<<<....>>>.....>>>>>>>....>>>>>>>>>>>>
..<<<<........>>>><<<<<<....<<<<<<.<<<<<<..<<<..<<
<<<.....>>>>>..>>>...<<....>>.......<<<<<..<<<<...
.>>>>...>>>>>.<<<<<<<<...<<....>>...>>>.>>>.>>....
>>>>>>.>>>>>>..<<.<..<<<<<<<.....<<<<<<<<<..<<<...
.<<<<<<<....>>>>>>>.....>>>...<<<<.<<.<<........>>
>>>>>>....>>>>>>>>>...<<.......>>......>>>>>>...>.
.>.>>..<<<<<<....<.<<<....>>>.><<<<<<<<<<...<<<.<<
<<<<<.....<<<....<<<....<<<<...<<<<<.......>>>>>.>
>>>....>>>..>.>>.....>>>>>...<<<<.<<<<.<......>>>>
>.>>>>.....>>>>>.>>>>>>>>.>>..<<<<.<<<<<.....>>>>>
.>>>>....<<<..[...>>>...<<<<<<<..<<<<(((.....<<<<<
<.....<<.....]....<<<.<<<<<<<<<<.......<<<<<.<<<..
.>>>.........<<....>>...>>>>>...>>>>>>>>>>>>>.....
.....))).>>...>>>>>>.>>>>..>>>>>>><<<<<..<<.......
..>>..>>>>>....>>>>>>..<<<<<<<<.<<......<<<<..<<<.
...>>>.>>>>...>>>>>>>>>>........>>>>>><<.....<<...
..<<<<<<.......>>>>>><<<<.....<<<<<.<<...<<<<<<...
<<.....>>.>>>>>>....((<<<<<<...<<....<<<....>>>...
.......<<<<<<....>>>>>>......>>....>>...<<<<<.....
...>>>>>))<<<<.<<<<<<<.....<<<....>>>.......<<<<<<
...<<<<.<<<<<<<.<<<<<<<<<<..[[[..>>>>>><...<<<<<..
..<<<<<<....<<<.....>>>....>>>>>>.....>>>>>....><<
<<<<<......>>>>>>>>>>>...>>>>>>>.>>>>.........>>>>
>>..........>>>..>>>>>>>>>>>>..>>.....<<......>>>>
>>>.<<<<.....>>>>..>>>>..<<<<.....<<<<<<<.<<......
...<.....<<<<<.....<..>......>>>>><<.<<<<<<<<<<<..
.........>>>>>..>>>>>>.>>............<<<<<<<<<..<<
<.........>>>..<<<<<<<....<<<<.....>>>>......>>>>>
>>...<<..<<<..<<<<<<....<<<.....<<<<....>>>>.....>
>>.>>>>..>>>>><<<<<<.......>>>>>>........<........
...<<<<<.......>>>>>.....>.....>>....>>.>>>>>>>..>
..>>.>>>>>>>..>>>>>>....>>....<<<<<........>>>>>..
..<<<<<..<<<.<<......<<<<.<<<<<<..<<<<<.<<<<<<<<..
<<<<<<<<<<<<...<<.................<......>........
............>>.>>.>>>>>>>>>>...<<<<<.....<<<<..<<<
<<......>>>>>..............<<<<...>>>>..>>>>..>>>>
>.....>>>>>>>>..>>>>>...<<<.....>>>..<<<<<<.......
....>>>>>>..<<...<<<<<<<...<<<<<<.......>>>>>>....
.<<...(((>>....>>>>>>>...<<<.<<<<<.......>>>>.>>>>
.<<<....>>>.>>)))......<<<<<<<..<<<<.))))))>>>>>>>
>>>>.........>>>>..>>>>>>.......<<.<...<<<<<<...<<
.......>>...>>>>>>....>.>.>.......<<<<<.<<<<<<..<.
<<<<<<<......>>>>>>>...>.<<<.........>>>.....>>>>>
..>...>>>.>>....<<<<<<<....>>>.>>>>....>>..>>>.>>>
>>....<<<<<<<<..<<<<.<.<<<<<.................>>>>>
.><<<<<...<<<<....<<<<<<<<<<]]].>>>>>..>>>>>...>>>
>..>>>>>.<<<<...<<<<<...........>>>>>...>>>>.>>>>.
...>>>>>>>>.....<<<<<<.<<<.<.....<<..........<<<<.
...>>>>......>>.......<<<<<<...<<<<<<<..<<<......>
>>..>>>>>>>.>>>>>>..............>.>>>.>>>>>>..<<<<
<<<.............>>....<<<<<<<<<.<<<....<<<<....<<<
<<......>>>>>...>>>>...>>>....>>>>.>>>>>..>>>>>.. |
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