Structure of PDB 4v5a Chain BF Binding Site BS01 |
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>4v5a Chain BA (length=2767)
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agaugguaagggcccacgguggaugccucggcacccgagccgaugaagga cguggcuaccugcgauaagccagggggagccgguagcgggcguggauccc uggauguccgaaugggggaacccggccggcgggaacgccggucaccgcgc uugcgcggggggaaccuggggaacugaaacaucucaguacccagaggaga ggaaagagaaaucgacucccugaguagcggcgagcgaaaggggaccagcc uaaaccguccggcuuguccgggcggggucgggggcccucggccgaauccc cagccuagccgaagcuguugggaagcagcgccagagagggugaaagcccc guaggcgaaagguggggggauaggugaggguacccgaguaccccgugguu cguggagccaugggggaaucugggcggaccaccgccuaaggcuaaguacu ccgggugaccgauagcgcaccaguaccgugagggaaaggugaaaagaacc ccgggaggggagugaaauagagccugaaaccgugggcuuacaagcaguca cggccccaagggguuguggcgugccuauugaagcaugagccggcgacuca cggucgugggcgagcuuaagccguugaggcggaggcguagggaaaccgag uccgaacagggcgcguccgcggccguggacccgaaaccgggcgagcuagc ccuggccagggugaagcuggggugagacccaguggaggcccgaaccggug ggggaugcaaaccccucggaugagcuggggcuaggagugaaaagcuaacc gagcccggagauagcugguucuccccgaaaugacuuuagggucagccuca ggcgcugacuggggccuguagagcacugauagggcuagggggcgccuacc aaacccugucaaacuccgaagggucccagguggagccugggagugagggc gcgagcgauaacguccgcguccgagcgcgggaacaaccgagaccgccagc uaaggcccccaagucugggcuaagugguaaaggauguggcgccgcgaaga cagccagucgaguggcgccgcgccgaaaaugaucggggcuuaagcccagc gccgaagcugcgggucugggggaugaccccaggcgguaggggagcguucc cgaugccgaugaaggccgacccgcgagggcggcuggagguaagggaagug cgaaugccggcaugaguaacgauaaagagggugagaaucccucucgccgu aagcccaaggguuccuacgcaauggucgucagcguaggguuaggcgggac cuaaggugaagccgaaaggcguagccgaagggcagccgguuaauauuccg gcccuucccgcaggugcgauggggggacgcucuaggcuagggggaccgga gccauggacgagcccggccagaagcgcagggugggagguaggcaaauccg ccucccaacaagcucugcgugguggggaagcccgcaaccccccgaagcca gggagccaagaaaagccucuaagcacaaccugcgggaacccguaccgcaa accgacacaggugggcgggugcaagagcacucaggcgcgcgggagaaccc ucgccaaggaacucugcaaguuggccccguaacuucgggagaaggggugc ucccuggggugaugagccccggggagccgcagugaacaggcucuggcgac uguuuaccaaaaacacagcucucugcgaacucguaagaggagguauaggg agcgacgcuugcccggugccggaaggucaaggggaggggugcaagccccg aaccgaagccccggugaacggcggccguaacuauaacgguccuaagguag cgaaauuccuugucggguaaguuccgaccugcacgaaaagcguaacgacc ggagcgcugucucggcgagggacccggugaaauugaacuggccgugaaga ugcggccuacccguggcaggacgaaaagaccccguggagcuuuacugcag ccugguguuggcucuuggucgcgccugcguaggauaggugggagcccggu gaaauaccacccuggcgcggcugggggccuaacccucggauggggggaca gcgcuuggcgggcaguuugacuggggcggucgccuccuaaaagguaacgg aggcgcccaaagguccccucaggcgggacggaaauccgccggagagcgca aggguagaagggggccugacugcgaggccugcaagccgagcaggggcgaa agccgggccuagugaaccgguggucccguguggaagggccaucgaucaac ggauaaaaguuaccccggggauaacaggcugaucucccccgagcguccac agcggcggggagguuuggcaccucgaugucggcucgucgcauccuggggc ugaagaaggucccaaggguugggcuguucgcccauuaaagcggcacgcga gcuggguucagaacgucgugagacaguucggucucuauccgccacgggcg caggaggcuugaggggggcucuuccuaguacgagaggaccggaagggacg caccucugguuucccagcugucccuccaggggcauaagcuggguagccau gugcggaagggauaaccgcugaaagcaucuaagcgggaagcccgccccaa gaugaggccucccacggcgucaagccgguaaggacccgggaagaccaccc gguggaugggccggggguguaagcgccgcgaggcguugagccgaccgguc ccaaucguccgaggucu |
.<<......<<<<<<<<<<<.....[[..[[<<<<<<[[<<......<<< <<<.[...((.>>>.....<<<<<<<..<<<))...].>>>.....>>>> >>>...>>>....<<<....>>><<<<<<<<....>>>>>>>>.<<<<<< ..>>>>>>.>>....<<<<<.....<......>......>>>>>...... .....<<....>>...<<<<<.....<<.....>>....>>>>>...((( ....<<<<<<<<.....>>>>>>>>.....<<<<<<<<...<<...<<<. <.<<<<.<<<....<<<<......>>>>.((......<<<.....))>>> ...>>>...>>>>...>>>>..>>..>>>>>.>>>.....<<<<<<<<<. ......>>>>>>>>>......<<<<<..<<<<>>>>>..)))......]] .>>>>>>.]]...............<<....>>....]].........<< <<....>>>>..................>>>>>>>>>>>.......<<<< <<<<<<....>>>>>>>>>>...<............>.<<<<<<....<< <<<<<<<<<<...<<<...<<<.....>>>...>>>...<<....>>..< <<<.....>>>>...>>>>>>>>>>>>..<<.<...<<<<<<.....<<< <<<<<<..<<<....<<<<<<......>>>>>>.....>>>...<<<<.< <<<........>>>>>>>>....>>>>>>>>>...<<<.....>>>.... ..>>>>>>......>.>>..<<<<<<....<<<<<....>>>>><<<<<< <<<.....<<<<<<<<<...<<<...<<<<<<<<.....<<....>>... ...>>>>>>>>..>>.>...>>>>>>>>>.....>>>>>>>.>>..<<<< <<<.<<......>>.>>>>>>>.....<<<......>>>...<<<<.<<< ...<<<(((.....<<<<<<...........<<..<<<<<<<<<...... ............>>>>>>>>>.>>..........)))......>>>>>>. >>>...>>>>>>><<<<<<<.......>>>>>>>....>>>>>>..<<<< <...<<<......<<<<<.<<<....>>>>>>>>...>>>..>>>>>... .....>>>>>><......<<.....<<<<<<.......>>>>>><<<<.. ..<<<<<.<<...<<<<<<...<<.....>>.>>>>>>....((<<<<.< <...<<<...<<<....>>>...>>>...>>...<<<<<........>>> >>))<<<<<<<<<<<<<...<<<<....<<<<<.<<<..<<<<<.<<<<. <<..(((....>>>>>><<<...<<<<<<<<<<<<<<<<.<<.....>>> >>>>>>.....>>>>>>>>>..>>><...........>>>>>>...>>>. .>>>>>.........>>>>...>>...>>>>>>>>>>>>>>>..>>.... .<<......>>>>>>>.<<<<<....>>>>>..>>>>..<<<<....<<< <<<<<.<<.........<.....<<<<<....<<..>>.....>>>>><< <<<<<<<<<<.....>>>>>>>>>>>>............<<<<<<<<<.. <<<.........>>>..<<<<<<<.....<<<....>>>.......>>>> >>>.<<<<<.<<<..<<<<<<<..<<<...<<...<<<<<....>>>>>. ..>>...>>>>>>>>..>>>>><<<<<<.......>>>>>>........< ...........<<<<<<.....>>>>>>.....>....>>>>>..>>.>> >>>>>..>..>>.>>>>>>>>.>>>>>>.....>.....<<<<<...... ..>>>>>..<<<<<<<<.(((.........<<<<.[[<<<<..<<<<<.< <<.<<<<<.<<<<<<<<.<<<<<<<...........<<<<<......... ......>>>>>..>>>>>>>.>>>>>>>>...<<<<<....>>>>>.... >>>>>.>>>..>>>>>..<<<<.....>>>><<<<<<...........>> >>>>..<<...<<<<<<<...<<<<<<.......>>>>>>.....<<... (((>>....>>>>>>>...<<<<..<<<......>>>..>>>>.<<<... .>>>.>>))).......<<<<<<.(((..>>>>..)))>>>>>>...... .......>>>>..]]>>>>.......<<<<...<<<<<<<..<<...... .>>>..>>>>>>....>>>.>.......<.<<<.<<<<<<..<<<<<<<< <......>>>>>>..>>>.<<<<<.....>>>>>.....>>>>>..>... >>>..>....<<<<<<<....>>>.>>>>........)))>>>>>>>>.. ..<<<<<<<...<<<<..<<<<<<<...............>>>>>>>.<< <<<...<<<<...<<<<<<<<<<<.)))>>>>>>...>>>>>...>>>>. >>>>>...<<<....<<<<<...........>>>>>....>>>.>>>>.. .....>>>>>>>...<<.......>>.....<<<<<<<<<.......>>> >>....<<<<<<<<.<<<....<<<<<....>>>>>...>>>..>>>>>. >>>...>>>>....>>. |
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PDB | 4v5a Crystal structure of the ribosome recycling factor bound to the ribosome. |
Resolution | 3.5 Å |
Binding residue (original residue number in PDB) | N29 H31 W34 E35 R38 Q40 L41 A42 K43 R44 R45 R46 T48 S50 T51 K52 R54 A58 Y59 S60 R62 K63 Q67 K68 H69 G71 R72 A73 R74 H75 I78 I82 F83 V84 V89 F90 P92 R95 Y99 T100 P102 K103 K104 R106 K135 T136 K137 R165 R168 N169 P171 E179 G180 N182 Y184 R205 |
Binding residue (residue number reindexed from 1) | N29 H31 W34 E35 R38 Q40 L41 A42 K43 R44 R45 R46 T48 S50 T51 K52 R54 A58 Y59 S60 R62 K63 Q67 K68 H69 G71 R72 A73 R74 H75 I78 I82 F83 V84 V89 F90 P92 R95 Y99 T100 P102 K103 K104 R106 K135 T136 K137 R165 R168 N169 P171 E179 G180 N182 Y184 R205 |
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Enzyme Commision number |
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