Structure of PDB 8j9j Chain B9 Binding Site BS01
Receptor Information
>8j9j Chain B9 (length=151) Species:
3039
(Euglena gracilis) [
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LKDLKKVKVTQPQSSIVLKPVPIGEPIIWSRVQHLYWRALHVIEDFPWMG
PSQTSEQFDIMLSVKEEIQKNANAAGALKDRLLEDFEAHIKRRDWMQRRV
HYFANGGPGYQTFASERHTLEQQGVWKAGTPIPFPKSDYNDDGPVEKGPY
Y
Ligand information
Ligand ID
ZMP
InChI
InChI=1S/C25H49N2O8PS/c1-4-5-6-7-8-9-10-11-12-13-14-15-22(29)37-19-18-26-21(28)16-17-27-24(31)23(30)25(2,3)20-35-36(32,33)34/h23,30H,4-20H2,1-3H3,(H,26,28)(H,27,31)(H2,32,33,34)/t23-/m1/s1
InChIKey
HDTINWYIVVMRIN-HSZRJFAPSA-N
SMILES
Software
SMILES
CACTVS 3.385
CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@@H](O)C(C)(C)CO[P](O)(O)=O
OpenEye OEToolkits 2.0.5
CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)C(C(C)(C)COP(=O)(O)O)O
ACDLabs 12.01
OP(=O)(OCC(C(C(NCCC(=O)NCCSC(=O)CCCCCCCCCCCCC)=O)O)(C)C)O
CACTVS 3.385
CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[CH](O)C(C)(C)CO[P](O)(O)=O
OpenEye OEToolkits 2.0.5
CCCCCCCCCCCCCC(=O)SCCNC(=O)CCNC(=O)[C@H](C(C)(C)COP(=O)(O)O)O
Formula
C25 H49 N2 O8 P S
Name
S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
ChEMBL
DrugBank
ZINC
ZINC000145431082
PDB chain
8j9j Chain AC Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
8j9j
Euglena's atypical respiratory chain adapts to the discoidal cristae and flexible metabolism.
Resolution
3.03 Å
Binding residue
(original residue number in PDB)
A46 I50 V71 I75 N78 A79 A81 K86 L89 F93 H96 R100
Binding residue
(residue number reindexed from 1)
A39 I43 V64 I68 N71 A72 A74 K79 L82 F86 H89 R93
Annotation score
1
External links
PDB
RCSB:8j9j
,
PDBe:8j9j
,
PDBj:8j9j
PDBsum
8j9j
PubMed
38388527
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