Structure of PDB 7tgh Chain B9 Binding Site BS01
Receptor Information
>7tgh Chain B9 (length=186) Species:
5911
(Tetrahymena thermophila) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKAYYFVKNFSWAEVSNLLCYGTKYPTVLNHQQKVTRLYRATLRRVYAHQ
VEGYKTDFKQYNENITDIGKDFNKMLALKPESLELQAYFKKYEDLQEELF
DPAMIIDESRPYAASSGRYYIFDDYLLKFDPFGFYSPKLLSENRPEEAMP
FYEDYPQNDSHWNLWEQFPEDFEDSNAEREAILKSN
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
7tgh Chain B8 Residue 602 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
7tgh
Structures of Tetrahymena 's respiratory chain reveal the diversity of eukaryotic core metabolism.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
K3 K9
Binding residue
(residue number reindexed from 1)
K2 K8
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:7tgh
,
PDBe:7tgh
,
PDBj:7tgh
PDBsum
7tgh
PubMed
35357889
UniProt
Q233X7
[
Back to BioLiP
]