Structure of PDB 6ydp Chain B4 Binding Site BS01

Receptor Information
>6ydp Chain B4 (length=62) Species: 9823 (Sus scrofa) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DCNRALLTRLHRQTYARLYPVLLVKQDGSTIHIRYREPRRMLTMPVDLDS
LSPEERRARFRK
Ligand information
>6ydp Chain BB (length=67) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
guuaauguagcuuaaucaaagcaaggcacugaaaaugccuagaugagccu
cagcuccauaaacacca
<<<.<<<..<<<.......>>>.<<<<<.......>>>>>....<<<<..
..>>>>>>>.>>>....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ydp Structural insights into mammalian mitochondrial translation elongation catalyzed by mtEFG1.
Resolution3.0 Å
Binding residue
(original residue number in PDB)
R43 Q47
Binding residue
(residue number reindexed from 1)
R9 Q13
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Cellular Component
GO:0005762 mitochondrial large ribosomal subunit

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:6ydp, PDBe:6ydp, PDBj:6ydp
PDBsum6ydp
PubMed32602580
UniProtA0A4X1ULI6

[Back to BioLiP]