Structure of PDB 9fyf Chain B Binding Site BS01

Receptor Information
>9fyf Chain B (length=331) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPVPSRARVYTDVNTHRPREYWDYESHVVEWGNQDDYQLVRKLGRGKYSE
VFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVK
DPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGI
MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL
LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE
DLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLD
KLLRYDHQSRLTAREAMEHPYFYTVVKDQAR
Ligand information
Ligand IDA1IG6
InChIInChI=1S/C25H30FN9O/c1-3-24(36)32-20-10-19(18(26)9-21(20)34-8-4-5-17(14-34)28-2)31-22-11-23(30-16-6-7-16)35-25(33-22)15(12-27)13-29-35/h9-11,13,16-17,28,30H,3-8,14H2,1-2H3,(H,31,33)(H,32,36)/t17-/m0/s1
InChIKeyOGORXCIJCPHAET-KRWDZBQOSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCC(=O)Nc1cc(c(cc1N2CCCC(C2)NC)F)Nc3cc(n4c(n3)c(cn4)C#N)NC5CC5
OpenEye OEToolkits 2.0.7CCC(=O)Nc1cc(c(cc1N2CCC[C@@H](C2)NC)F)Nc3cc(n4c(n3)c(cn4)C#N)NC5CC5
CACTVS 3.385CCC(=O)Nc1cc(Nc2cc(NC3CC3)n4ncc(C#N)c4n2)c(F)cc1N5CCC[C@@H](C5)NC
CACTVS 3.385CCC(=O)Nc1cc(Nc2cc(NC3CC3)n4ncc(C#N)c4n2)c(F)cc1N5CCC[CH](C5)NC
FormulaC25 H30 F N9 O
Name~{N}-[5-[[3-cyano-7-(cyclopropylamino)pyrazolo[1,5-a]pyrimidin-5-yl]amino]-4-fluoranyl-2-[(3~{S})-3-(methylamino)piperidin-1-yl]phenyl]propanamide;
7-[(1R,5S,6s)-6-amino-3-azabicyclo[3.1.0]hex-3-yl]-1-(2,4-difluorophenyl)-6-fluoro-4-oxo-1,4-dihydro-1,8-naphthyridine-3-carboxylic acid
ChEMBL
DrugBank
ZINC
PDB chain9fyf Chain B Residue 409 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9fyf Crystal structure of human Casein Kinase II subunit alpha (CK2a1) in complex with TR06772818
Resolution2.7 Å
Binding residue
(original residue number in PDB)
S51 V53 V66 K68 F113 V116 M163 I174 D175
Binding residue
(residue number reindexed from 1)
S49 V51 V64 K66 F111 V114 M161 I172 D173
Annotation score1
External links
PDB RCSB:9fyf, PDBe:9fyf, PDBj:9fyf
PDBsum9fyf
PubMed
UniProtP68400|CSK21_HUMAN Casein kinase II subunit alpha (Gene Name=CSNK2A1)

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