Structure of PDB 9cd7 Chain B Binding Site BS01

Receptor Information
>9cd7 Chain B (length=278) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ELPADPKWELSRARLTLGKPLGEGAFGQVVMAEAIGIDKDRAAKPVTVAV
KMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQGGPLYVLVEY
AAKGNLREFLRARRPPQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR
NVLVTEDNVMKIADFGLARDVHNLDYYKLPVKWMAPEALFDRVYTHQSDV
WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHDLYMIM
RECWHAAPSQRPTFKQLVEDLDRVLTVT
Ligand information
Ligand IDA1AV2
InChIInChI=1S/C25H24Cl2N6O3S/c1-15(23-19(26)9-28-10-20(23)27)36-17-4-5-21-18(7-17)24(31-30-21)16-3-6-22(29-8-16)32-11-25(12-32)13-33(14-25)37(2,34)35/h3-10,15H,11-14H2,1-2H3,(H,30,31)/t15-/m1/s1
InChIKeyJOAFWIHZEBKYQK-OAHLLOKOSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01CS(=O)(=O)N1CC2(CN(C2)c2ccc(cn2)c2n[NH]c3ccc(cc32)OC(C)c2c(Cl)cncc2Cl)C1
CACTVS 3.385C[C@@H](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl
OpenEye OEToolkits 2.0.7C[C@H](c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C
CACTVS 3.385C[CH](Oc1ccc2[nH]nc(c3ccc(nc3)N4CC5(C4)CN(C5)[S](C)(=O)=O)c2c1)c6c(Cl)cncc6Cl
OpenEye OEToolkits 2.0.7CC(c1c(cncc1Cl)Cl)Oc2ccc3c(c2)c(n[nH]3)c4ccc(nc4)N5CC6(C5)CN(C6)S(=O)(=O)C
FormulaC25 H24 Cl2 N6 O3 S
Name(3P)-5-[(1R)-1-(3,5-dichloropyridin-4-yl)ethoxy]-3-{6-[6-(methanesulfonyl)-2,6-diazaspiro[3.3]heptan-2-yl]pyridin-3-yl}-1H-indazole
ChEMBL
DrugBank
ZINC
PDB chain9cd7 Chain B Residue 801 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9cd7 Discovery of TYRA-300: First Oral Selective FGFR3 Inhibitor for the Treatment of Urothelial Cancers and Achondroplasia.
Resolution2.53 Å
Binding residue
(original residue number in PDB)
L478 G479 E480 V486 A506 Y557 A558 N562 R621 L624
Binding residue
(residue number reindexed from 1)
L21 G22 E23 V29 A49 Y100 A101 N105 R150 L153
Annotation score1
External links
PDB RCSB:9cd7, PDBe:9cd7, PDBj:9cd7
PDBsum9cd7
PubMed39258897
UniProtP22607|FGFR3_HUMAN Fibroblast growth factor receptor 3 (Gene Name=FGFR3)

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