Structure of PDB 8vnp Chain B Binding Site BS01

Receptor Information
>8vnp Chain B (length=162) Species: 5791 (Physarum polycephalum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYG
VGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCH
NTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATV
AGPQQRGSHFVV
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8vnp Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s
Resolution1.79 Å
Binding residue
(original residue number in PDB)		N257 R261 Q263 R274 G276 T295 A296 H298 L316 N319 N323
Binding residue
(residue number reindexed from 1)		N56 R60 Q62 R73 G75 T94 A95 H97 L115 N118 N122
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
Biological Process
GO:0006314 intron homing

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Molecular Function
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Biological Process
External links
PDB RCSB:8vnp, PDBe:8vnp, PDBj:8vnp
PDBsum8vnp
PubMed
UniProtQ94702|PPO1_PHYPO Intron-encoded endonuclease I-PpoI

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