Structure of PDB 8vmv Chain B Binding Site BS01

Receptor Information

>8vmv Chain B (length=162) Species: 5791 (Physarum polycephalum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

ALTNAQILAVIDSWEETVGQFPVITHHVPLGGGLQGTLHCYEIPLAAPYG
VGFAKNGPTRWQYKRTINQVVHRWGSHTVPFLLEPDNINGKTCTASHLCH
NTRCHNPLHLCWESLDDNKGRNWCPGPNGGCVHAVVCLRQGPLYGPGATV
AGPQQRGSHFVV

Ligand information

>8vmv Chain C (length=13) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

ttgactctcttaa

Receptor-Ligand Complex Structure

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Structure summary

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PDB	8vmv Homing endonuclease I-PpoI-DNA complex:reaction with 500 uM Mg2+ for 160s
Resolution	1.59 Å
Binding residue (original residue number in PDB)	L316 N323
Binding residue (residue number reindexed from 1)	L115 N122

Gene Ontology

	Molecular Function
GO:0004519	endonuclease activity

	Biological Process
GO:0006314	intron homing

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Molecular Function

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Biological Process

External links

PDB	RCSB:8vmv, PDBe:8vmv, PDBj:8vmv
PDBsum	8vmv
PubMed
UniProt	Q94702\|PPO1_PHYPO Intron-encoded endonuclease I-PpoI

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