Structure of PDB 8u0y Chain B Binding Site BS01
Receptor Information
>8u0y Chain B (length=176) Species:
193556
(Ceramium secundatum) [
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MLDAFSRVVVNSDSKAAYVGGSDLQALKTFIADGNKRLDAVNSIVSNASC
IVSDAVSGMICENPGLIAPGGNCYTNRRMAACLRDGEIILRYTSYALLAG
DSSVLEDRCLNGLKETYIALGVPTNSSVRAVSIMKSAAVAFISNTASQRK
MATTDGDCSALSSEVASYCDKVAAAI
Ligand information
Ligand ID
PUB
InChI
InChI=1S/C33H42N4O6/c1-7-20-19(6)32(42)37-27(20)14-25-18(5)23(10-12-31(40)41)29(35-25)15-28-22(9-11-30(38)39)17(4)24(34-28)13-26-16(3)21(8-2)33(43)36-26/h15,26-27,35H,7-14H2,1-6H3,(H,36,43)(H,37,42)(H,38,39)(H,40,41)/b28-15-/t26-,27+/m1/s1
InChIKey
KDCCOOGTVSRCHX-YYVBKQGDSA-N
SMILES
Software
SMILES
CACTVS 3.341
CCC1=C(C)C(=O)N[CH]1Cc2[nH]c(C=C3N=C(C[CH]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)NC1Cc2c(c(c([nH]2)C=C3C(=C(C(=N3)CC4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
OpenEye OEToolkits 1.5.0
CCC1=C(C(=O)N[C@H]1Cc2c(c(c([nH]2)\C=C/3\C(=C(C(=N3)C[C@@H]4C(=C(C(=O)N4)CC)C)C)CCC(=O)O)CCC(=O)O)C)C
CACTVS 3.341
CCC1=C(C)C(=O)N[C@H]1Cc2[nH]c(\C=C3/N=C(C[C@H]4NC(=O)C(=C4C)CC)C(=C3CCC(O)=O)C)c(CCC(O)=O)c2C
Formula
C33 H42 N4 O6
Name
PHYCOUROBILIN
ChEMBL
DrugBank
ZINC
ZINC000040164449
PDB chain
8u0y Chain B Residue 201 [
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Receptor-Ligand Complex Structure
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PDB
8u0y
Bacterial protein cpx
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
M59 N72 C73 R77 R78 A81 C82 R84 D85 I88 L120 S126 S127
Binding residue
(residue number reindexed from 1)
M59 N72 C73 R77 R78 A81 C82 R84 D85 I88 L120 S126 S127
Annotation score
4
External links
PDB
RCSB:8u0y
,
PDBe:8u0y
,
PDBj:8u0y
PDBsum
8u0y
PubMed
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