Structure of PDB 8tzl Chain B Binding Site BS01
Receptor Information
>8tzl Chain B (length=220) Species:
666
(Vibrio cholerae) [
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GVIRFQQVSKAYRGGRQALQKVDFHLRRGEMAFLGGHSGAGKSTLLKLIC
AIERPTDGKISFNGHDITRIPNKDIPFLRRNIGIVFQDHRLLMDRSIYDN
VALPMRIESISENEIKRRVSAALDKTGLLDKARCLPSQLSGGEQQRVGIA
RAVVNRPTLLLADEPTGNLDPELSSRVLRLFEEFNRAGVTILLATHDIHL
VNSRPQYRHLELNQGFLSEV
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
8tzl Chain B Residue 302 [
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Receptor-Ligand Complex Structure
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PDB
8tzl
Structural insights into the FtsEX-EnvC complex regulation on septal peptidoglycan hydrolysis in Vibrio cholerae.
Resolution
3.55 Å
Binding residue
(original residue number in PDB)
Y20 R24 A26 G47 A48 G49 K50 S51 T52
Binding residue
(residue number reindexed from 1)
Y12 R16 A18 G39 A40 G41 K42 S43 T44
Annotation score
5
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016887
ATP hydrolysis activity
GO:0022857
transmembrane transporter activity
Biological Process
GO:0051301
cell division
GO:0055085
transmembrane transport
Cellular Component
GO:0005886
plasma membrane
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Molecular Function
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Cellular Component
External links
PDB
RCSB:8tzl
,
PDBe:8tzl
,
PDBj:8tzl
PDBsum
8tzl
PubMed
38070498
UniProt
A0A085R4L6
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