Structure of PDB 8trn Chain B Binding Site BS01
Receptor Information
>8trn Chain B (length=367) Species:
5811
(Toxoplasma gondii) [
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VQALVVDNGSGNVKAGVAGDDAPRAVFPSIVGKPKNPGIMVGMEEKDCYV
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVL
LTEAPLNPKANRERMTQIMFETFNVPAMYVAIQAVLSLYSSGRTTGIVLD
SGDGVSHTVPIYEGYALPHAIMRLDLAGRDLTEYMMKILHERGYGFTTSA
EKEIVRDIKEKLCYIALDFDEEMKAAEDSSDIEKSYELPDGNIITVGNER
FRCPEALFQPSFLGKEAAGVHRTTFDSIMKCDVDIRKDLYGNVVLSGGTT
MYEGIGERLTKELTSLAPSTMKIKVVAPPERKYSVWIGGSILSSLSTFQQ
MWITKEEYDESGPSIVH
Ligand information
Ligand ID
9UE
InChI
InChI=1S/C36H45BrN4O6/c1-20-15-21(2)17-23(4)47-32(43)19-30(25-11-13-26(42)14-12-25)40-35(45)31(18-28-27-9-7-8-10-29(27)39-33(28)37)41(6)36(46)24(5)38-34(44)22(3)16-20/h7-15,21-24,30-31,39,42H,16-19H2,1-6H3,(H,38,44)(H,40,45)/b20-15+/t21-,22-,23-,24-,30+,31+/m0/s1
InChIKey
GQWYWHOHRVVHAP-DHKPLNAMSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.6
CC1CC(OC(=O)CC(NC(=O)C(N(C(=O)C(NC(=O)C(CC(=C1)C)C)C)C)Cc2c3ccccc3[nH]c2Br)c4ccc(cc4)O)C
CACTVS 3.385
C[CH]1C[CH](C)C=C(C)C[CH](C)C(=O)N[CH](C)C(=O)N(C)[CH](Cc2c(Br)[nH]c3ccccc23)C(=O)N[CH](CC(=O)O1)c4ccc(O)cc4
OpenEye OEToolkits 2.0.6
C[C@@H]\1C[C@@H](OC(=O)C[C@@H](NC(=O)[C@H](N(C(=O)[C@@H](NC(=O)[C@H](C/C(=C1)/C)C)C)C)Cc2c3ccccc3[nH]c2Br)c4ccc(cc4)O)C
CACTVS 3.385
C[C@H]1C[C@@H](C)\C=C(/C)C[C@H](C)C(=O)N[C@@H](C)C(=O)N(C)[C@H](Cc2c(Br)[nH]c3ccccc23)C(=O)N[C@H](CC(=O)O1)c4ccc(O)cc4
Formula
C36 H45 Br N4 O6
Name
Jasplakinolide
ChEMBL
CHEMBL257166
DrugBank
ZINC
ZINC000028108899
PDB chain
8trn Chain A Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
8trn
Toxoplasma gondii actin filaments are tuned for rapid disassembly and turnover.
Resolution
3.0 Å
Binding residue
(original residue number in PDB)
I76 R178
Binding residue
(residue number reindexed from 1)
I71 R173
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.6.4.-
Gene Ontology
Molecular Function
GO:0005524
ATP binding
GO:0016787
hydrolase activity
Cellular Component
GO:0005737
cytoplasm
GO:0005856
cytoskeleton
View graph for
Molecular Function
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Cellular Component
External links
PDB
RCSB:8trn
,
PDBe:8trn
,
PDBj:8trn
PDBsum
8trn
PubMed
38418447
UniProt
P53476
|ACT_TOXGO Actin (Gene Name=ACT1)
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