Structure of PDB 8tr2 Chain B Binding Site BS01

Receptor Information
>8tr2 Chain B (length=745) Species: 10116 (Rattus norvegicus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RREIKIEGDLVLGGLFPINEKGTGTEECGRINEDRGIQRLEAMLFAIDEI
NKDNYLLPGVKLGVHILDTCSRDTYALEQSLEFVRASLTKVDPLLIAGVI
GGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFY
QAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIATAEK
VGRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVNASFT
WVASDGWGAQESIVKGSEHVAYGAITLELASHPVRQFDRYFQSLNPYNNH
RNPWFRDFWEQKFQCSLNHRCDKHLAIDSSNYEQESKIMFVVNAVYAMAH
ALHKMQRTLCPNTTKLCDAMKILDGKKLYKEYLLKINFTAPFNPNKGADS
IVKFDTFGDGMGRYNVFNLQQTGKYSYLKVGHWAETLSLDVDSIHWSRNS
VPTSQCSDPNEMKNMDVCCWICIPCEPYEYLVDEFTCMDCGPGQWPTADL
SGCYNLPEDYIKWEDAWAIGPVTIACLGFLCTCIVITVFIKHNNTASGRE
LCYILLFGVSLSYCMTFIAKPSPVICALRRLGLGTSFAICYSALLTKTNC
IARIFKNGSSQVFICLGLILVQIVMVSVWLILETPGTRRYTLPEKRETVI
LKCNVKDSSMLISLTYDVVLVILCTVYAFKTRKCFNEAKFIGFTMYTTCI
IWLAFLPIFYVTSTTMCISVSLSGFVVLGCLFAPKVHIVLFQPQK
Ligand information
Ligand IDJIX
InChIInChI=1S/C7H9NO5/c8-7(6(11)12)1-13-4-2(3(4)7)5(9)10/h2-4H,1,8H2,(H,9,10)(H,11,12)/t2-,3-,4+,7-/m0/s1
InChIKeyYASVRZWVUGJELU-NIMDSCNUSA-N
SMILES
SoftwareSMILES
CACTVS 3.385N[C]1(CO[CH]2[CH]([CH]12)C(O)=O)C(O)=O
CACTVS 3.385N[C@]1(CO[C@@H]2[C@H]([C@H]12)C(O)=O)C(O)=O
ACDLabs 12.01OC(=O)C1(N)COC2C(C21)C(=O)O
OpenEye OEToolkits 2.0.7C1C(C2C(C2O1)C(=O)O)(C(=O)O)N
OpenEye OEToolkits 2.0.7C1[C@]([C@H]2[C@@H]([C@H]2O1)C(=O)O)(C(=O)O)N
FormulaC7 H9 N O5
Name(1S,4R,5R,6S)-4-amino-2-oxabicyclo[3.1.0]hexane-4,6-dicarboxylic acid
ChEMBL
DrugBank
ZINC
PDB chain8tr2 Chain B Residue 1001 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8tr2 Structural basis of allosteric modulation of metabotropic glutamate receptor activation and desensitization.
Resolution3.5 Å
Binding residue
(original residue number in PDB)
R64 R68 S149 Y150 A172 T174 Y222 D301
Binding residue
(residue number reindexed from 1)
R35 R39 S103 Y104 A126 T128 Y176 D255
Annotation score1
External links
PDB RCSB:8tr2, PDBe:8tr2, PDBj:8tr2
PDBsum8tr2
PubMed37645747
UniProtP31422|GRM3_RAT Metabotropic glutamate receptor 3 (Gene Name=Grm3)

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