Structure of PDB 8qxc Chain B Binding Site BS01

Receptor Information
>8qxc Chain B (length=211) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ETTVTQSPSSMYASLGERVTITCKASQDINSYLSWFQQKPGKSPKTLIYR
ASRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYYCLQYDEFPYTFGG
GTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKV
DNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQG
LSSPVTKSFNR
Ligand information
Ligand IDX5X
InChIInChI=1S/C24H34N4O7S/c1-14(29)26-16(22(32)33)11-7-8-12-25-20(31)18(21-28-19(23(34)35)24(2,3)36-21)27-17(30)13-15-9-5-4-6-10-15/h4-6,9-10,16,18-19,21,28H,7-8,11-13H2,1-3H3,(H,25,31)(H,26,29)(H,27,30)(H,32,33)(H,34,35)/t16-,18+,19-,21+/m0/s1
InChIKeyJXFMICAVKFQPRG-GZMOKQHVSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC(=O)N[C@@H](CCCCNC(=O)[C@H]([C@@H]1N[C@H](C(S1)(C)C)C(=O)O)NC(=O)Cc2ccccc2)C(=O)O
CACTVS 3.385CC(=O)N[CH](CCCCNC(=O)[CH](NC(=O)Cc1ccccc1)[CH]2N[CH](C(O)=O)C(C)(C)S2)C(O)=O
OpenEye OEToolkits 2.0.7CC(=O)NC(CCCCNC(=O)C(C1NC(C(S1)(C)C)C(=O)O)NC(=O)Cc2ccccc2)C(=O)O
CACTVS 3.385CC(=O)N[C@@H](CCCCNC(=O)[C@@H](NC(=O)Cc1ccccc1)[C@@H]2N[C@@H](C(O)=O)C(C)(C)S2)C(O)=O
FormulaC24 H34 N4 O7 S
Name(2R,4S)-2-[(1R)-2-[[(5S)-5-acetamido-6-oxidanyl-6-oxidanylidene-hexyl]amino]-2-oxidanylidene-1-(2-phenylethanoylamino)ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid;
PenG-Lys
ChEMBL
DrugBank
ZINC
PDB chain8qxc Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qxc Pharmacologic and immunogenetic factors determine the B cell response to beta-lactam antibiotics
Resolution2.3 Å
Binding residue
(original residue number in PDB)
Y68 Y110 Y115
Binding residue
(residue number reindexed from 1)
Y49 Y91 Y96
Annotation score1
External links