Structure of PDB 8qjd Chain B Binding Site BS01

Receptor Information
>8qjd Chain B (length=1036) Species: 1197719 (Salmonella bongori N268-08) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EPVDIGTGDFLQHFSVLSLPGSLPLTLSRFYRSQAKGTGIFGPKWTDEWS
CMLTVHGNDMHFTNHEGVDLYYRIPQNGIFRDTANSRQAYYRLSGDIRDE
LTIFDRRSQHSQIFSLTDNGIYLLSAIHDRYGNRADFIRTEGLLTGIHHS
DGYTLALGWQQRQLVSIDLATPQRQRLVTCHYDKNGYLAECDTIQFSHLW
HEYTSEGWMTRWRDTDKTCVDIVYDTLGRTVSTLSTEGYFDDQFLYNDDE
KCTTYLDAEGGETRYWYNGDGLVTRSIDPLGREETSVWENTRLRSRTDAL
GRTTAYDYNNEGEISRVSLPGGYSLYYDYNEHGQLTRLSAPGNQVWLWEY
DGKGSMVCLTDPQGRQQQFSYSEHGDLLRQIMPNGATWRWSHDALHQVRA
TTAPDGGVTQTEQDILGRLLSVKDPLGYTTQFRYSKNHAGPQGSVEEIRR
PDGVRELMRQNSEKLPESFTDGEGNTTRYEYGAFDLLTAVIRPDGERLAC
RYDKLTRLTEITNAEGEHYRLRYDKAGQLVAETDFTGRTLTYSYDAAGRC
IRTTFPDGTHLNRQYSTTDQVTREEVAQGDSDRVLSCTTFIYDALSRLTE
ARNNDATVTYEYDDASRVTAETINGRRTEYNYDPDQDTVSQRTTAGITEC
FTRGLTGELTQWQIDGHTPLTLEHDLRGQEISRQSEAGFSLRQNYTPTGM
LTGQQAGRNNTLQRQWLYDKAYNLTMISDSLRGTMVNSVTANDQISHATW
TGSSDIPMREERFAYDRNLNITRRQTQVNGVPDSEAYQHQQHGRVTSREY
KAWRHTFVRVIRDEQTTWKYDVNGRLVEKLIDKGGYRPLRWRYRWDARSQ
LTGLETPEGERREYKYDPFGRRISKRCTNRDRPGTDFHWNGDQLTEEIPV
GTDGTPEYENAIRWIYEPGSFTPLARYEKGQLHYTITDTVGRIQELLTED
GTIVWRGKQHLWGREEGRNKDDAPSCRLRFPGQYEDEESGLYYNRFRYYD
CEAGQYLCADPIGLRGGINLYAYAPNPLSWIDPLGL
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8qjd Chain B Residue 1501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8qjd T6SS-associated Rhs proteins form toxin containers: Structural and functional insights into bacterial weaponry and self-protection
Resolution2.203 Å
Binding residue
(original residue number in PDB)		H415 D418 H420
Binding residue
(residue number reindexed from 1)		H56 D59 H61
Annotation score4
External links