Structure of PDB 8q6u Chain B Binding Site BS01

Receptor Information
>8q6u Chain B (length=166) Species: 226900 (Bacillus cereus ATCC 14579) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MVIKLESFKKSDFKQLINWINSEEFLIQWSGNAFTFPLDEQQLEKYIESA
NTLAFKVVDEETSDVIGHISLGQIDNINKSARIGKVLVGRGRSIGKHMMK
AVLHIAFDELKLHRVTLGVYDFNTSAISAYEAIGFVKEGLLRESKRVGET
YWNLWEMSMLEYEWKK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8q6u Chain B Residue 204 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8q6u Functional and structural characterisation of RimL from Bacillus cereus, a new N alpha-acetyltransferase of ribosomal proteins that was wrongly assigned as an aminoglycosyltransferase.
Resolution1.516 Å
Binding residue
(original residue number in PDB)
H107 E112
Binding residue
(residue number reindexed from 1)
H104 E109
Annotation score1
Enzymatic activity
Enzyme Commision number 2.3.1.82: aminoglycoside 6'-N-acetyltransferase.
Gene Ontology
Molecular Function
GO:0016746 acyltransferase activity
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups
GO:0046872 metal ion binding
GO:0047663 aminoglycoside 6'-N-acetyltransferase activity

View graph for
Molecular Function
External links
PDB RCSB:8q6u, PDBe:8q6u, PDBj:8q6u
PDBsum8q6u
PubMed38395274
UniProtQ81D84

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