Structure of PDB 8oy9 Chain B Binding Site BS01

Receptor Information
>8oy9 Chain B (length=421) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNPKRIRALKSQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVVVV
FCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKISRF
VKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEASQ
KHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPFEPWHFEPGEKAAKKV
MESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVEKAES
NPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAKESLNAHRNDV
RSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYMRMYWAKKILEWSE
SPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRAWGEREVTGKI
RYMSYEGCKRKFDVKLYIEKY
Ligand information
Receptor-Ligand Complex Structure
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PDB8oy9 Time-resolved crystallography captures light-driven DNA repair
Resolution2.24 Å
Binding residue
(original residue number in PDB)		A160 H161 R164 R256 N257 E301 W305 M379 R429 R441 Y442 M443 S444 G447 R450 K451
Binding residue
(residue number reindexed from 1)		A156 H157 R160 R216 N217 E261 W265 M339 R389 R401 Y402 M403 S404 G407 R410 K411
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oy9, PDBe:8oy9, PDBj:8oy9
PDBsum8oy9
PubMed38033070
UniProtQ8PYK9

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