Structure of PDB 8oy7 Chain B Binding Site BS01

Receptor Information
>8oy7 Chain B (length=428) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTPDPLFEPWHFEPGEK
AAKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEV
EKAESNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAKESLNA
HRNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYMRMYWAKKI
LEWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRAWGERE
VTGKIRYMSYEGCKRKFDVKLYIEKYSA
Ligand information
Receptor-Ligand Complex Structure
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PDB8oy7 Time-resolved crystallography captures light-driven DNA repair
Resolution2.36 Å
Binding residue
(original residue number in PDB)		A160 H161 N257 E301 W305 Y376 M379 W421 R429 W431 R441 Y442 M443 S444 G447 R450 K451
Binding residue
(residue number reindexed from 1)		A158 H159 N222 E266 W270 Y341 M344 W386 R394 W396 R406 Y407 M408 S409 G412 R415 K416
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oy7, PDBe:8oy7, PDBj:8oy7
PDBsum8oy7
PubMed38033070
UniProtQ8PYK9

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