Structure of PDB 8oy3 Chain B Binding Site BS01

Receptor Information
>8oy3 Chain B (length=427) Species: 192952 (Methanosarcina mazei Go1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MNPKRIRALKSGKQGDGPVVYWMSRDQRAEDNWALLFSRAIAKEANVPVV
VVFCLTDEFLEAGIRQYEFMLKGLQELEVSLSRKKIPSFFLRGDPGEKIS
RFVKDYNAGTLVTDFSPLRIKNQWIEKVISGISIPFFEVDAHNVVPCWEA
SQKHEYAAHTFRPKLYALLPEFLEEFPELEPNSVTDPLFEPWHFEPGEKA
AKKVMESFIADRLDSYGALRNDPTKNMLSNLSPYLHFGQISSQRVVLEVE
KAESNPGSKKAFLDEILIWKEISDNFCYYNPGYDGFESFPSWAKESLNAH
RNDVRSHIYTLEEFEAGKTHDPLWNASQMELLSTGKMHGYMRMYWAKKIL
EWSESPEKALEIAICLNDRYELDGRDPNGYAGIAWSIGGVHDRAWGEREV
TGKIRYMSYEGCKRKFDVKLYIEKYSA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8oy3 Time-resolved crystallography captures light-driven DNA repair
Resolution2.16 Å
Binding residue
(original residue number in PDB)		A160 H161 R256 N257 E301 W305 Y376 M379 W421 R429 W431 R441 Y442 M443 S444 E446 G447 R450 K451
Binding residue
(residue number reindexed from 1)		A158 H159 R220 N221 E265 W269 Y340 M343 W385 R393 W395 R405 Y406 M407 S408 E410 G411 R414 K415
Enzymatic activity
Enzyme Commision number 4.1.99.3: deoxyribodipyrimidine photo-lyase.
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003904 deoxyribodipyrimidine photo-lyase activity
GO:0016829 lyase activity
Biological Process
GO:0000719 photoreactive repair
GO:0006281 DNA repair

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Molecular Function
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Biological Process
External links
PDB RCSB:8oy3, PDBe:8oy3, PDBj:8oy3
PDBsum8oy3
PubMed38033070
UniProtQ8PYK9

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