Structure of PDB 8oi3 Chain B Binding Site BS01

Receptor Information
>8oi3 Chain B (length=183) Species: 374 (Bradyrhizobium) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PVLGPTQWLGDEHIQRDYELLAQELQQNNPDLAARTRFVDPLIAQMLRSP
SKEVAERALGWVRPGTADFLFLPVSDASDTDRHQRGSHWSLLLVDRRDRG
RRVAYHYDSTQGYNDGLAAELAGRLDANLQQAPIRQQQNSYDCGVFVLDG
TRELVRRLAARRPDLNLNNLVISRQELRDRLGA
Ligand information
Ligand IDAYE
InChIInChI=1S/C3H7N/c1-2-3-4/h2H,1,3-4H2
InChIKeyVVJKKWFAADXIJK-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NCC=C
OpenEye OEToolkits 1.5.0C=CCN
ACDLabs 10.04C=C\CN
FormulaC3 H7 N
Nameprop-2-en-1-amine;
ALLYLAMINE
ChEMBLCHEMBL57286
DrugBank
ZINCZINC000017654097
PDB chain8oi3 Chain B Residue 1101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8oi3 Structure of NopD with AtSUMO2
Resolution1.5 Å
Binding residue
(original residue number in PDB)		W836 S915 Q965 S968 Y969 C971
Binding residue
(residue number reindexed from 1)		W8 S87 Q137 S140 Y141 C143
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008234 cysteine-type peptidase activity
GO:0019784 deNEDDylase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:8oi3, PDBe:8oi3, PDBj:8oi3
PDBsum8oi3
PubMed
UniProtA0A2U9K2V6

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