Structure of PDB 8k7p Chain B Binding Site BS01
Receptor Information
>8k7p Chain B (length=382) Species:
1280
(Staphylococcus aureus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
QPLNKYPVVFVHGFLGLVGDNAPALYPNYWGGNKFKVIEELRKQGYNVHQ
ASVSAFGSNYDRAVQLYYYIKGGRVDYGAAHAAKYGHERYGKTYKGIMPN
WEPGKKVHLVGHSMGGQTIRLMEEFLRNGNKEEIAYHQAHGGEISPLFTG
GHNNMVASITTLATPHNGSQAADKFGNTEAVRKIMFALNRFMGNKYSNID
LGLTQWGFKQLPNESYIDYIKRVSKSKIWTSDDNAAYDLTLDGSAKLNNM
TSMNPNITYTTYTGVSSHTGPLGYENPDLGTFFLMDTTSRIIGHDAREEW
RKNDGVVPVISSLHPSNQPFVNVTNNEPATRRGIWQVKPILQGWDHVDFI
GVDFLDFKRKGSELANFYIGIINDLLSVEATE
Ligand information
Ligand ID
4I1
InChI
InChI=1S/C18H34O2/c1-2-3-4-5-6-7-8-9-10-11-12-13-14-15-16-17-18(19)20/h12-13H,2-11,14-17H2,1H3,(H,19,20)/b13-12-
InChIKey
CNVZJPUDSLNTQU-SEYXRHQNSA-N
SMILES
Software
SMILES
CACTVS 3.385
CCCCCCCCCCC\C=C/CCCCC(O)=O
OpenEye OEToolkits 2.0.7
CCCCCCCCCCCC=CCCCCC(=O)O
CACTVS 3.385
CCCCCCCCCCCC=CCCCCC(O)=O
OpenEye OEToolkits 2.0.7
CCCCCCCCCCC/C=C\CCCCC(=O)O
Formula
C18 H34 O2
Name
Petroselinic acid
ChEMBL
CHEMBL3139878
DrugBank
ZINC
ZINC000008221028
PDB chain
8k7p Chain B Residue 408 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8k7p
Crystal structure of Staphylococcus aureus lipase complex with unsaturated petroselinic acid.
Resolution
2.19 Å
Binding residue
(original residue number in PDB)
G16 F17 Y32 S116 M117 F178
Binding residue
(residue number reindexed from 1)
G13 F14 Y29 S113 M114 F175
Annotation score
1
Enzymatic activity
Enzyme Commision number
3.1.1.3
: triacylglycerol lipase.
External links
PDB
RCSB:8k7p
,
PDBe:8k7p
,
PDBj:8k7p
PDBsum
8k7p
PubMed
38757397
UniProt
A0A0U1MWF9
[
Back to BioLiP
]