Structure of PDB 8jyl Chain B Binding Site BS01

Receptor Information
>8jyl Chain B (length=527) Species: 669 (Vibrio harveyi) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NDPSNYQLLIKNLLFSPVAFNPEQEIVYANHRRHSYKTFHDRVRQFANAL
TKMGVKKGDTVAVMDYDSHRYLECYFAIPMIGAKLHMINVRLSPEQILYT
IDHAEDDIILIHEEFLPILDQIKGRIDTVTRYVVLRDDEECEYERLLEQE
STEYNFPDFDENTVATTFYTTGTTGFPKGVFFTHRQLVLHTMGILSTIGT
NASQGRLHQGDIYMPITPMFHVHAWGLPYMATMLGVKQVYPGKYVPDVLL
NLIEQEKVTFSHCVPTILHLLLSSPKSKAMDFSGWKVVIGGAALPKALCK
SALERDIDVFAGYGMSETGPILSIVQLTPEQLELDVDQQAEYRSKTGKKV
ALVEAYIVDEDMNKLPHDGETAGEIVVRAPWLTPNYYKDNKNSKALWRGG
YLHTGDVAHIDDEGFIKITDRVKDMIKISGEWVSSLELEDILHQHQSVSE
VAVIGMPHNKWGEVPLALVTLKEDAQVTEKELLGFAKDFINKGILAREAL
LLKVKIVDEIAKTSVGKVDKKELRKLH
Ligand information
Ligand IDVUL
InChIInChI=1S/C20H32N6O7S/c1-2-3-4-5-6-7-8-9-14(27)25-34(30,31)32-10-13-16(28)17(29)20(33-13)26-12-24-15-18(21)22-11-23-19(15)26/h11-13,16-17,20,28-29H,2-10H2,1H3,(H,25,27)(H2,21,22,23)/t13-,16-,17-,20-/m1/s1
InChIKeyWHJSYVVAGQVYEC-AEVYOOLXSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)NS(=O)(=O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)O
CACTVS 3.385CCCCCCCCCC(=O)N[S](=O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23
CACTVS 3.385CCCCCCCCCC(=O)N[S](=O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23
OpenEye OEToolkits 2.0.7CCCCCCCCCC(=O)NS(=O)(=O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)O
FormulaC20 H32 N6 O7 S
Name[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl N-decanoylsulfamate
ChEMBL
DrugBank
ZINC
PDB chain8jyl Chain B Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8jyl Acyl-ACP Synthetase structure bound to C10-AMS
Resolution2.33 Å
Binding residue
(original residue number in PDB)
W230 G295 G296 A297 A298 G317 Y318 G319 M320 S321 I326 D411 R426 K432 W437
Binding residue
(residue number reindexed from 1)
W225 G290 G291 A292 A293 G312 Y313 G314 M315 S316 I321 D406 R421 K427 W432
Annotation score1
External links