Structure of PDB 8jl0 Chain B Binding Site BS01

Receptor Information
>8jl0 Chain B (length=469) Species: 35554 (Geobacter sulfurreducens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LSQLAAHSTIPEPLLLFKDNRTDTHPLRGLSQYGPYSACFNLPGQVRLAY
LAPTEHMRKLDAIVRELQNPATPKEATNYYVEYGGFEKVFKVPLVMPQEH
LRCLALDECHGVAANGNGLALADKIVQSMSGLFRQKHAFDVLLVYLPASW
KKCFEYDGFDLHDRIKAKVAPLNLPIQIINDTALTRQCRANVMWGVSVAL
YAKAGGIPWKLADWDKDEAYIGLSYAIKKNAEGQEYTTCCSQVFDPDGTG
FEFVAYDTREFITDRKGNPYLSYQEMQSVLSKSLHLYQSSHNGRMPRKIF
IHKTTHFTEDEIQGAFDSFSSSTEIELVQIIQSTNWYGLKVDGKKGDKPV
APASYPVDRGLYQPLTESECLLWTQGSVMGVNQQNPGQPVFKEAALTPLP
NPIMLRRFSGNGGWHATCSSILALTKVDWNNNTLYKKLPVTLVYSQVFAD
VVKQTPEIVNEIYDYRFFM
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8jl0 Structural basis of antiphage immunity generated by a prokaryotic Argonaute-associated SPARSA system.
Resolution3.1 Å
Binding residue
(original residue number in PDB)
E79 A80 E159 R190 Y229 A230 I231 I335 Q336 S337 S358 Y359 K396
Binding residue
(residue number reindexed from 1)
E75 A76 E155 R186 Y225 A226 I227 I331 Q332 S333 S354 Y355 K392
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
Biological Process
GO:0008150 biological_process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:8jl0, PDBe:8jl0, PDBj:8jl0
PDBsum8jl0
PubMed38200015
UniProtQ74DF5

[Back to BioLiP]