Structure of PDB 8i87 Chain B Binding Site BS01

Receptor Information
>8i87 Chain B (length=467) Species: 429344 (Maribacter polysiphoniae) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKELIYIEEPKILFAHGQKCTDARDGLALFGPLNNLYGIKSGVIGTKQGL
KIFRDYLDHIQKPIYNSNSITRPMFPGFEAVFDCKWESTGITFKEVTNED
IGKFLYNSSTHKRTYDLVSLFIDKIISANKNEDENVDVWFVIVPDEIYKY
CRPNSVLPKENYDAQFHDQFKARLLKHTIPTQIFRESTLAWRDFKNAFGL
PIRDFSKIEGHLAWTISTAAFYKAGGKPWKLSDVRNGVCYLGLVYKKVEK
SKNPRNACCAAQMFLDNGDGTVFKGEVGPWYNPKNGQYHLEPKEAKALLS
QSLQSYKEQIGEYPKEVFIHAKTRFNHQEWDAFLEVTPKETNLVGVTISK
TKPLKLYKTEGDYTILRGNAYVVNERSAFLWTVGYVPKIQTALSMEVPNP
LFIEINKGEADIKQVLKDILSLTKLNYNACIFADGEPVTLRFADKIGEIL
TASTDIKTPPLAFKYYI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8i87 Structural insights into mechanisms of Argonaute protein-associated NADase activation in bacterial immunity.
Resolution3.1 Å
Binding residue
(original residue number in PDB)
Y148 Q205 H207 K211 Q222 I223 F224 R225 T228 F245 H251 L252 T255 K324 N325 K395 E436 N468 A469 G475 R481 I507
Binding residue
(residue number reindexed from 1)
Y148 Q165 H167 K171 Q182 I183 F184 R185 T188 F205 H211 L212 T215 K284 N285 K355 E396 N428 A429 G435 R441 I467
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:8i87, PDBe:8i87, PDBj:8i87
PDBsum8i87
PubMed37311833
UniProtA0A316E3U6

[Back to BioLiP]