Structure of PDB 8gsr Chain B Binding Site BS01

Receptor Information
>8gsr Chain B (length=285) Species: 314266 (Sphingomonas sp. SKA58) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKFCRFGQRGQEKPGIIDADGNIRDLSGVVPELTIDALAAAKGADIALLP
LVEGEPRYGVPVKGIGKIVAIGLNYEDHAIESNLPIPTEPMMFMKALSSL
NGPNDEVVLPKNSTHGDWEVELGVVIGETCRFVSEDEALSKVAGYVLVND
VSERFNQKQRGTQWSKGKGHDTFCPVGPWLVTPDEVGDPQDLDVHLDVNG
ERMQTGNTKTMIFNVAQLISYVSEYITLYPGDLMITGTPPGVGEGKKPQA
IYLKAGDVMELGIEKLGTQRQQVSEWRHLGDEVFG
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8gsr Chain B Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8gsr Crystal Structure of l-2,4-Diketo-3-deoxyrhamnonate Hydrolase Involved in the Nonphosphorylated l-Rhamnose Pathway from Bacteria.
Resolution1.73 Å
Binding residue
(original residue number in PDB)		E119 E121 D150
Binding residue
(residue number reindexed from 1)		E119 E121 D150
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:8gsr, PDBe:8gsr, PDBj:8gsr
PDBsum8gsr
PubMed36563174
UniProtQ1NEI7

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