Structure of PDB 8ete Chain B Binding Site BS01

Receptor Information
>8ete Chain B (length=315) Species: 216816 (Bifidobacterium longum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CTGVRFSDDEGNTYFGRNLDWSFSYGETILVTPRGYHYDTVFGAGGKAKP
NAVIGVGVVMADRPMYFDCANEHGLAIAGLNFPGYASFVHEPVEGTENVA
TFEFPLWVARNFDSVDEVEETLRNVTLVSQIVPGQQESLLHWFIGDGKRS
IVVEQMADGMHVHHDDVDVLTNQPTFDFHMENLRNYMCVSNEMAEPTSWG
KASLTAWGAGVGMHGIPGDVSSPSRFVRVAYTNAHYPQQNDEAANVSRLF
HTLGSVQMVDGMAKMGDGQFERTLFTSGYSSKTNTYYMNTYDDPAIRSYA
MADYDMDSSELISVA
Ligand information
Ligand IDWU5
InChIInChI=1S/C25H41FO2/c1-16(4-6-19(28)15-26)21-8-9-22-20-7-5-17-14-18(27)10-12-24(17,2)23(20)11-13-25(21,22)3/h16-18,20-23,27H,4-15H2,1-3H3/t16-,17-,18-,20+,21-,22+,23+,24+,25-/m1/s1
InChIKeyYECICDGDDQGLJC-QIAJLKNUSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7C[C@H](CCC(=O)CF)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC[C@H]4[C@@]3(CC[C@H](C4)O)C)C
OpenEye OEToolkits 2.0.7CC(CCC(=O)CF)C1CCC2C1(CCC3C2CCC4C3(CCC(C4)O)C)C
ACDLabs 12.01FCC(=O)CCC(C)C1CCC2C3CCC4CC(O)CCC4(C)C3CCC12C
CACTVS 3.385C[CH](CCC(=O)CF)[CH]1CC[CH]2[CH]3CC[CH]4C[CH](O)CC[C]4(C)[CH]3CC[C]12C
CACTVS 3.385C[C@H](CCC(=O)CF)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C
FormulaC25 H41 F O2
Name(5R)-1-fluoro-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-7-hydroxy-9a,11a-dimethylhexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]hexan-2-one (non-preferred name)
ChEMBL
DrugBank
ZINC
PDB chain8ete Chain B Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8ete Structural diversity of bile salt hydrolases reveals rationale for substrate selectivity
Resolution2.3 Å
Binding residue
(original residue number in PDB)
C2 W22 F68 N82
Binding residue
(residue number reindexed from 1)
C1 W21 F67 N81
Annotation score3
Enzymatic activity
Enzyme Commision number 2.3.1.-
3.5.1.-
3.5.1.24: choloylglycine hydrolase.
3.5.1.74: chenodeoxycholoyltaurine hydrolase.
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0016740 transferase activity
GO:0016787 hydrolase activity
GO:0045302 choloylglycine hydrolase activity
GO:0047742 chenodeoxycholoyltaurine hydrolase activity
Biological Process
GO:0006629 lipid metabolic process
GO:0006699 bile acid biosynthetic process
Cellular Component
GO:0009274 peptidoglycan-based cell wall

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:8ete, PDBe:8ete, PDBj:8ete
PDBsum8ete
PubMed
UniProtQ9KK62|CBH_BIFLN Bile salt hydrolase/transferase (Gene Name=bsh)

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