Structure of PDB 8eeh Chain B Binding Site BS01

Receptor Information
>8eeh Chain B (length=435) Species: 1697 (Corynebacterium ammoniagenes) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVVIIGAGFAGLVAARELQTGIEYEILEAKDRIGGRAWTEERMGRPLELG
ATWVHWFQAHTWTEIMRYGQRTEITASPSGNDAHWVTDGKVVKGTEDDLD
EKLTAAMGVTYEGSEEYFPNPHDPLWVLSDDFDGPAEVRERFLSDDQTNA
IDLVKEAGFDQETIDLVDAFWCAGYIGDPYTGSALMAKQWGALSDNRYRV
MEDITLKWKLNNGMRSLYDGIAGDLNTDIRLNTPVAKVEHHDNGATVTTE
SGEVIEASAVICTVPVGALSNIEFSPALPDAVQSVIDDKWNSQGAKIWIK
IKGHHRFLGYAPKPAKMSVVRSEYFMDDDTTILVGFGYDNTNIDLNSIED
AQAVINQWRDDLEVVDTTGHNWVADKWAGQAWGTLRKGQFTQGWSLFDQL
FFAGSDYAYGWRGVCVDGALEKGMTTARQVINSMR
Ligand information
Ligand IDTSS
InChIInChI=1S/C10H12N2/c11-6-5-8-7-12-10-4-2-1-3-9(8)10/h1-4,7,12H,5-6,11H2
InChIKeyAPJYDQYYACXCRM-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NCCc1c[nH]c2ccccc12
OpenEye OEToolkits 1.5.0c1ccc2c(c1)c(c[nH]2)CCN
ACDLabs 10.04c1cccc2c1c(cn2)CCN
FormulaC10 H12 N2
Name2-(1H-INDOL-3-YL)ETHANAMINE;
TRYPTAMINE
ChEMBLCHEMBL6640
DrugBankDB08653
ZINCZINC000000120144
PDB chain8eeh Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8eeh Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase.
Resolution1.78 Å
Binding residue
(original residue number in PDB)
A178 L211 W387 V423
Binding residue
(residue number reindexed from 1)
A173 L206 W382 V414
Annotation score4
Gene Ontology
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UnboundLocalError
Python 3.6.8: /usr/bin/python3
Wed Nov 27 02:33:52 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '8eeh', asym_id = 'B', bs = 'BS01', title = 'Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='8eeh', asym_id='B', bs='BS01', title='Structural Insights into the Substrate Range of a Bacterial Monoamine Oxidase.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0016491', uniprot = '', pdbid = '8eeh', asym_id = 'B'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0016491', uniprot='', pdbid='8eeh', asym_id='B')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>