Structure of PDB 8e2q Chain B Binding Site BS01
Receptor Information
>8e2q Chain B (length=160) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SEVEFSHEYWMRHALALAKRARDEREVPVGAVLVLNNRVIGEGWNRGIGL
HDPTAHAEIMALRQGGLVMQNYRLYDATLYTTFEPCVMCAGAMIHSRIGR
VVFGVRNAKTGAAGSLMDVLHHPGMNHRVEITEGILADECEALLCRFFRM
PRRVFNAQKK
Ligand information
>8e2q Chain E (length=11) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
gcggctgcgga
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8e2q
Improved cytosine base editors generated from TadA variants.
Resolution
2.34 Å
Binding residue
(original residue number in PDB)
R74 Y76 N127
Binding residue
(residue number reindexed from 1)
R73 Y75 N126
Enzymatic activity
Enzyme Commision number
3.5.4.33
: tRNA(adenine(34)) deaminase.
Gene Ontology
Molecular Function
GO:0003824
catalytic activity
GO:0008251
tRNA-specific adenosine deaminase activity
GO:0008270
zinc ion binding
GO:0016787
hydrolase activity
GO:0042803
protein homodimerization activity
GO:0046872
metal ion binding
GO:0052717
tRNA-specific adenosine-34 deaminase activity
Biological Process
GO:0002100
tRNA wobble adenosine to inosine editing
GO:0006382
adenosine to inosine editing
GO:0008033
tRNA processing
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:8e2q
,
PDBe:8e2q
,
PDBj:8e2q
PDBsum
8e2q
PubMed
36624149
UniProt
P68398
|TADA_ECOLI tRNA-specific adenosine deaminase (Gene Name=tadA)
[
Back to BioLiP
]