Structure of PDB 8dpb Chain B Binding Site BS01

Receptor Information
>8dpb Chain B (length=312) Species: 272630 (Methylorubrum extorquens AM1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MSATLPDMDTLRERLLAGDRAALARAITLAESRRADHRAAVRDLIDAVLP
QTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDPSSTRTGG
SILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDV
ILVETVGVGQSETAVADLTDFFLVLMLPGAGDELQGIKKGILELADMIAV
NKADDGDGERRASAAASEYRAALHILTPWTPPVVTISGLHGKGLDSLWSR
IEDHRSKLDVKWMWALVHERLHQRLVGSAEVRQATAEAERAVAGGEHSPA
AGADAIATLIGL
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8dpb Chain B Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8dpb Structure of metallochaperone in complex with the cobalamin-binding domain of its target mutase provides insight into cofactor delivery.
Resolution2.72 Å
Binding residue
(original residue number in PDB)		S69 D105 E154
Binding residue
(residue number reindexed from 1)		S69 D105 E154
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding
GO:0046872 metal ion binding
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Cellular Component
External links
PDB RCSB:8dpb, PDBe:8dpb, PDBj:8dpb
PDBsum8dpb
PubMed36787360
UniProtC5AP93

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