Structure of PDB 8dkr Chain B Binding Site BS01

Receptor Information
>8dkr Chain B (length=248) Species: 2034346 (Pseudomonas phage vB_PaeM_E217) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GIPKTGGDKSVINLKFILAAIDAHKKLGWEPAGSKRIGFDVADDGEDANA
TTLMHGNVIMEVDEWDGLEDELLKSSSRVYNLAKIKGASVTYDSIGVGAH
VGSKFAELNDASPDFKLIYDPFNAGGAVDKPDDVYMKLPHTTIKNKDHFS
NIKAQKWEEVATRFRKTYEAVEHGKVYPFDELISINSETIHPDKLNQLCI
ELSSPRKDLDMNGRFKVESKKDMREKRKIKSPNIADSVIMSAILPIRK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8dkr Chain B Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8dkr Terminase Subunits from the Pseudomonas-Phage E217.
Resolution2.05 Å
Binding residue
(original residue number in PDB)		V246 D248 D298
Binding residue
(residue number reindexed from 1)		V41 D43 D93
Annotation score4
Enzymatic activity
Enzyme Commision number 3.1.-.-
External links