Structure of PDB 8djq Chain B Binding Site BS01
Receptor Information
>8djq Chain B (length=390) Species:
1078020
(Mycolicibacterium thermoresistibile ATCC 19527) [
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ATTTVGLTDLKVRLVRDDFADAVAWVARSLPSRPTVPVLAGVLLTGSDDG
LTISSFDYEVSAEVQIPAEIAAPGTVLVSGRLLSEITRALPNKPVDLSVE
GTRVSLTCGSARFSLPTMAVEDYPALPELPAETGSVPADLFAEAIGQVAV
AAGRDDTLPMLTGIRVEISGDRMVLAATDRFRLAVRELTWTTKTPDVEAA
VLVPAKTLAEAAKTGLDGSEVQLALGAGDGLLGIRSEGKRSTTRLLDAEF
PKFRQLLPTEHTAMATIGVGELTEAIKRVALVADRGAQVRMEFADDVLHL
SAGADDVGRAEEDLPVSFSGEPLTIAFNPGYLTDGLGALHSERVTFGFTT
PSKPAVLRPATEADAALNGNGPFPAAETDYVYLLMPVRLP
Ligand information
>8djq Chain F (length=6) Species:
1773
(Mycobacterium tuberculosis) [
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QFDLFG
Receptor-Ligand Complex Structure
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PDB
8djq
Interaction of the sliding clamp with mycobacterial polymerases
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
T179 R181 F182 R183 L184 P257 L262 M391 P392 V393 R394
Binding residue
(residue number reindexed from 1)
T178 R180 F181 R182 L183 P251 L256 M385 P386 V387 R388
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003887
DNA-directed DNA polymerase activity
GO:0008408
3'-5' exonuclease activity
Biological Process
GO:0006260
DNA replication
GO:0006271
DNA strand elongation involved in DNA replication
GO:0071897
DNA biosynthetic process
Cellular Component
GO:0005737
cytoplasm
GO:0009360
DNA polymerase III complex
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Molecular Function
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Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8djq
,
PDBe:8djq
,
PDBj:8djq
PDBsum
8djq
PubMed
UniProt
G7CIP4
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