Structure of PDB 8dfo Chain B Binding Site BS01

Receptor Information
>8dfo Chain B (length=270) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTDAKRVTDWMCTNFYDI
RTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAE
DNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEH
DRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSF
ADYAVTVGQAPEGVEVKEML
Ligand information
>8dfo Chain L (length=45) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggauugaaacgccaugcucaggcuggcgagugcgcgccacucauc
.............................................
Receptor-Ligand Complex Structure
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PDB8dfo Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Resolution3.1 Å
Binding residue
(original residue number in PDB)		N22 G23 N29 R32 T43 C46 K48 R52 F119 G120 V122 C129 Q131 V132 I154 T155 R156 M157 R173 S223 A224 R226
Binding residue
(residue number reindexed from 1)		N22 G23 N29 R32 T43 C46 K48 R52 F103 G104 V106 C113 Q115 V116 I138 T139 R140 M141 R153 S203 A204 R206
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0043571 maintenance of CRISPR repeat elements

View graph for
Biological Process
External links
PDB RCSB:8dfo, PDBe:8dfo, PDBj:8dfo
PDBsum8dfo
PubMed36805026
UniProtQ72WF7

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