Structure of PDB 8dej Chain B Binding Site BS01

Receptor Information
>8dej Chain B (length=270) Species: 882 (Nitratidesulfovibrio vulgaris str. Hildenborough) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MTAIANRYEFVLLFDVENGNPNGDPDAGNMPRIDPETGHGLVTDVCLKRK
IRNHVALTKEGAERFNIYIQEKAILNETHERAYTDAKRVTDWMCTNFYDI
RTFGAVMTTEVNCGQVRGPVQMAFARSVEPVVPQEVSITRMAVTTKAEAE
DNRTMGRKHIVPYGLYVAHGFISAPLAEKTGFSDEDLTLFWDALVNMFEH
DRSAARGLMSSRKLIVFKHQNRLGNAPAHKLFDLVKVSRAEGSSGPARSF
ADYAVTVGQAPEGVEVKEML
Ligand information
>8dej Chain L (length=47) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggauugaaacgccaugcucaggcuggcgagugggcgccacucuccaa
...............................................
Receptor-Ligand Complex Structure
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PDB8dej Structural snapshots of R-loop formation by a type I-C CRISPR Cascade.
Resolution2.86 Å
Binding residue
(original residue number in PDB)		G23 R32 C46 K48 R49 G120 V122 N128 C129 Q131 V132 R133 I154 T155 R156 M157 S223 R226
Binding residue
(residue number reindexed from 1)		G23 R32 C46 K48 R49 G104 V106 N112 C113 Q115 V116 R117 I138 T139 R140 M141 S203 R206
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0043571 maintenance of CRISPR repeat elements

View graph for
Biological Process
External links
PDB RCSB:8dej, PDBe:8dej, PDBj:8dej
PDBsum8dej
PubMed36805026
UniProtQ72WF7

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