Structure of PDB 8ctz Chain B Binding Site BS01

Receptor Information
>8ctz Chain B (length=131) Species: 86665 (Halalkalibacterium halodurans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EIIWESLSVDVGSQGNPGIVEYKGVDTKTGEVLFEREPIPIGTNNMGEFL
AIVHGLRYLKERNSRKPIYSNSQTAIKWVKDKKAKSTLVRNEETALIWKL
VDEAEEWLNTHTYETPILKWQTDKWGEIKAD
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8ctz Conformation and Pairing Properties of an O 6 -Methyl-2'-deoxyguanosine-Directed Benzimidazole Nucleoside Analog in Duplex DNA.
Resolution2.32 Å
Binding residue
(original residue number in PDB)
N132 K180
Binding residue
(residue number reindexed from 1)
N71 K119
Enzymatic activity
Enzyme Commision number 3.1.26.4: ribonuclease H.
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0004523 RNA-DNA hybrid ribonuclease activity

View graph for
Molecular Function
External links
PDB RCSB:8ctz, PDBe:8ctz, PDBj:8ctz
PDBsum8ctz
PubMed35973057
UniProtQ9KEI9|RNH1_HALH5 Ribonuclease H (Gene Name=rnhA)

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