Structure of PDB 8buz Chain B Binding Site BS01
Receptor Information
>8buz Chain B (length=333) Species:
9913
(Bos taurus) [
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VYRATHRLLLLGAGESGKSTIVKQMRILHVKATKVQDIKNNLKEAIETIV
AAMSNLVPPVELANPENQFRVDYILSVMNVPDFDFPPEFYEHAKALWEDE
GVRACYERSNEYQLIDCAQYFLDKIDVIKQDDYVPSDQDLLRCRVLTSGI
FETKFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVI
REDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLAEKVLAGKSK
IEDYFPEFARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTASGDGRH
YCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQ
Ligand information
Ligand ID
GSP
InChI
InChI=1S/C10H16N5O13P3S/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(26-9)1-25-29(19,20)27-30(21,22)28-31(23,24)32/h2-3,5-6,9,16-17H,1H2,(H,19,20)(H,21,22)(H2,23,24,32)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey
XOFLBQFBSOEHOG-UUOKFMHZSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc2c(n1C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=S)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=S)(O)O)O)O)N=C(NC2=O)N
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=S)[CH](O)[CH]3O
ACDLabs 10.04
S=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(O)C3O
Formula
C10 H16 N5 O13 P3 S
Name
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
ChEMBL
CHEMBL1204628
DrugBank
DB01864
ZINC
ZINC000008217391
PDB chain
8buz Chain B Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
8buz
Structure of Adenylyl cyclase 8 bound to stimulatory G-protein, Ca2+/Calmodulin, Forskolin and MANT-GTP
Resolution
3.5 Å
Binding residue
(original residue number in PDB)
E50 S51 G52 K53 S54 T55 L198 R199 C200 R201 K293 D295 L296 V367
Binding residue
(residue number reindexed from 1)
E15 S16 G17 K18 S19 T20 L141 R142 C143 R144 K236 D238 L239 V310
Annotation score
3
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003924
GTPase activity
GO:0005525
GTP binding
GO:0019001
guanyl nucleotide binding
GO:0031683
G-protein beta/gamma-subunit complex binding
Biological Process
GO:0007165
signal transduction
GO:0007186
G protein-coupled receptor signaling pathway
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:8buz
,
PDBe:8buz
,
PDBj:8buz
PDBsum
8buz
PubMed
38351373
UniProt
P04896
|GNAS2_BOVIN Guanine nucleotide-binding protein G(s) subunit alpha isoforms short (Gene Name=GNAS)
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