Structure of PDB 8axf Chain B Binding Site BS01

Receptor Information
>8axf Chain B (length=256) Species: 1980427 (Emaravirus fici) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LKPIDVEVQAFTSASSNFTLHKYRNICHVDTCAAHLSKSKENKEKLQARN
LRLIVSSNEFLVVVKELNDSTVDNVVSFNKACAIMSAGVLKHTFDEEFDW
KLSKYVKTNNTTKVIPDVKIINRLAGQMGLSAGNPYYWMIVPGYEFLYEL
YPAEVLAYTLVRLQYRKNLNIPDSMTDADIVSSLVMKMNRIHKLEQTSFD
EALNLIGKDNVSEAYVELARDIGSTSKTKRNDEAILKFRELIASFLPALE
ADRIAS
Ligand information
>8axf Chain Q (length=42) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
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Receptor-Ligand Complex Structure
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PDB8axf RNA Encapsulation Mode and Evolutionary Insights from the Crystal Structure of Emaravirus Nucleoprotein.
Resolution2.54 Å
Binding residue
(original residue number in PDB)		F63 K95 K120 E121 L122 N123 S132 N134 K135 I176 R178 L179 G181 Q182 P197 F201 R217 L224 N225 P227 M230 M241 K242 N244 R245 T280 S281 K282 R285
Binding residue
(residue number reindexed from 1)		F11 K40 K65 E66 L67 N68 S77 N79 K80 I121 R123 L124 G126 Q127 P142 F146 R162 L169 N170 P172 M175 M186 K187 N189 R190 T225 S226 K227 R230
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0019013 viral nucleocapsid

View graph for
Cellular Component
External links
PDB RCSB:8axf, PDBe:8axf, PDBj:8axf
PDBsum8axf
PubMed37039649
UniProtI2FFM8

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