Structure of PDB 8alm Chain B Binding Site BS01
Receptor Information
>8alm Chain B (length=171) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQF
FPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAF
KLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAM
MDKNADGKLTLQEFQEGSKAD
Ligand information
>8alm Chain P (length=28) Species:
10116
(Rattus norvegicus) [
Search peptide sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
SVPRFIKYTGYGNAAGLLAARGLMAGGR
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8alm
The neuronal calcium sensor NCS-1 regulates the phosphorylation state and activity of the Ga chaperone and GEF Ric-8A.
Resolution
1.85402 Å
Binding residue
(original residue number in PDB)
W30 G33 D37 I51 Y52 F55 F72 F85 A88 L89 T92 W103 Y108 V125 R148 I152 M156 F169 G172
Binding residue
(residue number reindexed from 1)
W25 G28 D32 I46 Y47 F50 F67 F80 A83 L84 T87 W98 Y103 V120 R143 I147 M151 F164 G167
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0005245
voltage-gated calcium channel activity
GO:0005509
calcium ion binding
GO:0005515
protein binding
GO:0008048
calcium sensitive guanylate cyclase activator activity
GO:0046872
metal ion binding
Biological Process
GO:0010975
regulation of neuron projection development
GO:0070588
calcium ion transmembrane transport
Cellular Component
GO:0005737
cytoplasm
GO:0005794
Golgi apparatus
GO:0005886
plasma membrane
GO:0014069
postsynaptic density
GO:0030424
axon
GO:0030425
dendrite
GO:0043231
intracellular membrane-bounded organelle
GO:0045202
synapse
GO:0048471
perinuclear region of cytoplasm
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8alm
,
PDBe:8alm
,
PDBj:8alm
PDBsum
8alm
PubMed
38018500
UniProt
P62166
|NCS1_HUMAN Neuronal calcium sensor 1 (Gene Name=NCS1)
[
Back to BioLiP
]