Structure of PDB 8ai2 Chain B Binding Site BS01

Receptor Information
>8ai2 Chain B (length=323) Species: 1423 (Bacillus subtilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LYFQGHMYNKTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTE
FAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEKQITLISNGFWGLSK
KKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYPDIDI
SLNMAVTKDKMSNHILEELGDSILGVKITKFPMISVGAAKTRIKQENIHK
FYSLEDEDSLHCPGYDIVYHHDGEIYPCCSPAIFETKITLREEYNQSFER
TVEKLNSNLLLFILRKEGFKWFLNILKENNKIEEFDIPYEFSSICGVCGS
LFNSAEKINYFYPYMEKYYNENF
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8ai2 Structural and mechanistic basis for RiPP epimerization by a radical SAM enzyme.
Resolution2.393 Å
Binding residue
(original residue number in PDB)		S7 T57 I85 F175 I178 P207 G208 D210 C223 S224 P225 F228 C289
Binding residue
(residue number reindexed from 1)		S13 T63 I91 F181 I184 P213 G214 D216 C229 S230 P231 F234 C295
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0046872 metal ion binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:8ai2, PDBe:8ai2, PDBj:8ai2
PDBsum8ai2
PubMed38158457
UniProtQ45595|YYDG_BACSU Putative peptide biosynthesis protein YydG (Gene Name=yydG)

[Back to BioLiP]